| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,361,357 | A→G | L193S (TTG→TCG) | cadC ← | cadBA operon transcriptional activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,361,357 | 0 | A | G | 100.0% | 118.0 / NA | 32 | L193S (TTG→TCG) | cadC | cadBA operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (14/18); total (14/18) | |||||||||||
GGAGAAGGTGTTAAGTGATGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGCTTTTAACTGGGGA > NC_000913/4361230‑4361490 | ggAGAAGGTGTTAAGTGCTGTCTCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGAt < 2:238167/139‑1 (MQ=255) gaAGGTGTTAAGTGATGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTg < 1:263801/139‑1 (MQ=255) ggTGTTAAGTGATGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTc < 1:160302/139‑1 (MQ=255) tGATGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGa < 1:177364/139‑1 (MQ=255) aTGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACg > 2:417760/1‑139 (MQ=255) aTGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACg > 2:216455/1‑139 (MQ=255) ccaccaAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATc > 1:7731/1‑139 (MQ=255) cccACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGaaa < 2:2897/139‑1 (MQ=255) cTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTAc < 2:7731/139‑1 (MQ=255) cTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTAc < 1:258689/139‑1 (MQ=255) tAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTa < 1:417760/139‑1 (MQ=255) agagagCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTaca < 2:449804/139‑1 (MQ=255) cTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATa > 1:323648/1‑139 (MQ=255) aTACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGAc > 1:29371/1‑95 (MQ=255) aTACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGAc < 2:29371/95‑1 (MQ=255) cTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGacaaca > 1:12463/1‑139 (MQ=255) gTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGaaaaaa > 2:474217/1‑139 (MQ=255) aaCTTTGATTTACCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCa < 1:316290/139‑1 (MQ=255) tatttaCCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTAc > 1:601111/1‑91 (MQ=255) tatttaCCATATTAATGTCAATATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTAc < 2:601111/91‑1 (MQ=255) aaTATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAAc > 2:278075/1‑67 (MQ=255) aaTATCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAAc < 1:278075/67‑1 (MQ=255) atatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTaca < 2:543942/81‑1 (MQ=255) atatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTaca > 1:543942/1‑81 (MQ=255) atatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGc > 1:235821/1‑139 (MQ=255) tatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTAc < 2:406716/70‑1 (MQ=255) tatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGacaaca < 2:309253/99‑1 (MQ=255) tatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGacaaca > 1:309253/1‑99 (MQ=255) tatCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATAAAGACTTGAAAACGCTAc > 1:406716/1‑70 (MQ=255) atCGCGTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGCtt < 2:188933/139‑1 (MQ=255) cgTGGATTGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGCTTTTaa > 2:59448/1‑139 (MQ=255) tGAGCGAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGCTTTTAACTGGGGa < 2:323648/139‑1 (MQ=255) | GGAGAAGGTGTTAAGTGATGTCGCCACCAAATCACCCACGCCTATCGCGTAAGAGAGCTGATACGGGGAACTCCAGCTGTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGGTAGTGAATCGTTTGCTTTTAACTGGGGA > NC_000913/4361230‑4361490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |