Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	528,998	(A)7→6	pseudogene (359/491 nt)	ybbD →	pseudogene

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	528,992	0	A	.	100.0%	233.8 / NA	56	pseudogene (353/491 nt)	ybbD	pseudogene
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (25/31);  total (25/31)

TATACACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTTGTG  >  NC_000913/528854‑529122                                                                                                                                           |                                                                                                                                   tataCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCTAGATACa                                                                                                                                    >  1:868485/1‑139 (MQ=255) tataCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACa                                                                                                                                    >  1:1332824/1‑139 (MQ=255) tataCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACa                                                                                                                                    >  1:1405946/1‑139 (MQ=255) tataCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACa                                                                                                                                    >  1:600826/1‑139 (MQ=255) tataCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACa                                                                                                                                    >  1:812439/1‑139 (MQ=255)   taCACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTTACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaa                                                                                                                                  >  1:684966/1‑139 (MQ=255)      acaAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCTGATACaacaaa                                                                                                                               >  1:979547/1‑139 (MQ=255)      acaAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaa                                                                                                                               >  2:1208014/1‑139 (MQ=255)      acaAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGAAGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGCGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaa                                                                                                                               >  2:389182/1‑139 (MQ=255)        aaaTGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagt                                                                                                                             >  1:1483435/1‑137 (MQ=255)         aaTGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            <  2:1405946/139‑4 (MQ=255)          aTGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtgt                                                                                                                           >  2:971555/1‑135 (MQ=255)           tGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGtgtg                                                                                                                         >  2:1058100/1‑139 (MQ=255)             tAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTgtggt                                                                                                                       <  2:684966/139‑1 (MQ=255)                aagaTGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTa                                                                                                                    >  2:770425/1‑139 (MQ=255)                    tgatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            <  2:783989/128‑4 (MQ=255)                    tgatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            >  1:783989/1‑125 (MQ=255)                    tgatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTgtggt                                                                                                                       <  2:1179273/132‑1 (MQ=255)                    tgatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAata                                                                                                                <  1:389182/139‑1 (MQ=255)                    tgatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATAAAAGAATGATCCAGATAC‑AAAAAAGTgtggt                                                                                                                       >  1:1179273/1‑132 (MQ=255)                     gatTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAatat                                                                                                               >  2:1428699/1‑139 (MQ=255)                       ttattTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATgg                                                                                                             >  1:374944/1‑139 (MQ=255)                                       tttCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCaa                                                                                             <  1:1399954/139‑1 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAata                                                                                                                <  1:150394/115‑1 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAata                                                                                                                >  2:150394/1‑115 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGa                                                                                        <  1:1058100/139‑1 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGa                                                                                        <  2:374944/139‑1 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGa                                                                                        <  1:1428699/139‑1 (MQ=255)                                            cTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGAGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGa                                                                                        <  2:979547/139‑1 (MQ=255)                                                   atgatgatgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTgtggt                                                                                                                       <  2:555256/101‑1 (MQ=255)                                                   atgatgatgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTgtggt                                                                                                                       >  1:555256/1‑101 (MQ=255)                                                     gatgatgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTaaa                                                                               >  2:652467/1‑139 (MQ=255)                                                         atgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAg                                                                                                  >  2:138989/1‑116 (MQ=255)                                                         atgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAg                                                                                                  <  1:138989/116‑1 (MQ=255)                                                         atgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCtt                                                                           >  2:741514/1‑139 (MQ=255)                                                         atgGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCtt                                                                           >  2:84540/1‑139 (MQ=255)                                                           gggggTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCtttt                                                                         >  2:225094/1‑139 (MQ=255)                                                                      tAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTg                                                              >  1:623414/1‑139 (MQ=255)                                                                       aaGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGa                                                             >  2:161529/1‑139 (MQ=255)                                                                            aaCATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTa                                                        <  1:652467/139‑1 (MQ=255)                                                                              cATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGt                                                               <  2:11170/130‑1 (MQ=255)                                                                              cATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGt                                                               >  1:11170/1‑130 (MQ=255)                                                                              cATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAAt                                                      >  1:45781/1‑139 (MQ=255)                                                                               aTTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATg                                                     <  2:812439/139‑1 (MQ=255)                                                                                    cAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑GAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACg                                                <  1:801772/139‑1 (MQ=255)                                                                                      gTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCa                                              <  2:1332824/139‑1 (MQ=255)                                                                                      gTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCa                                              <  1:84540/139‑1 (MQ=255)                                                                                       tGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTttg                                                                    <  2:74517/116‑1 (MQ=255)                                                                                       tGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTttg                                                                    >  1:74517/1‑116 (MQ=255)                                                                                       tGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCat                                             <  2:1483435/139‑1 (MQ=255)                                                                                         aGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGt                                                               >  2:1273733/1‑119 (MQ=255)                                                                                         aGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGt                                                               <  1:1273733/119‑1 (MQ=255)                                                                                         aGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTCTGTTGGTGAAATTAATGTTACGCatta                                           >  2:869079/1‑139 (MQ=255)                                                                                           ggCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCattatt                                         <  1:741514/139‑1 (MQ=255)                                                                                                 ggAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            <  2:12950/51‑4 (MQ=255)                                                                                                 ggAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            >  1:12950/1‑48 (MQ=255)                                                                                                   aaCAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            >  1:794285/1‑46 (MQ=255)                                                                                                   aaCAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACaaaaaagtg                                                                                                                            <  2:794285/49‑4 (MQ=255)                                                                                                   aaCAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCat                                             >  2:581299/1‑127 (MQ=255)                                                                                                   aaCAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACa                                 <  1:971555/139‑1 (MQ=255)                                                                                                   aaCAAGTGGCGAAAATCGTATCAAAGAATGAGCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATAACAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCat                                             <  1:581299/127‑1 (MQ=255)                                                                                                        gTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAatat                            <  2:868485/139‑1 (MQ=255)                                                                                                        gTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAatat                            <  1:773302/139‑1 (MQ=255)                                                                                                        gTGGCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAatat                            >  2:773302/1‑139 (MQ=255)                                                                                                           gCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTgg                         >  2:1458816/1‑139 (MQ=255)                                                                                                           gCGAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTgg                         >  1:229016/1‑139 (MQ=255)                                                                                                            tgAAAATCGTATCAAAGAATGATCCAGATAC‑AAAAAAGTGTGGGGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGa                        >  2:1328513/2‑139 (MQ=255)                                                                                                                        cAAAGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCt            <  1:770425/139‑1 (MQ=255)                                                                                                                          aaGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGa          <  2:600826/139‑1 (MQ=255)                                                                                                                          aaGAATGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGa          <  2:45781/139‑1 (MQ=255)                                                                                                                             aaTGATCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGc       <  1:302436/139‑1 (MQ=255)                                                                                                                                  tCCAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTtgtg  <  2:781352/139‑1 (MQ=255)                                                                                                                                    cAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCa                                              >  2:825140/1‑93 (MQ=255)                                                                                                                                    cAGATAC‑AAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCa                                              <  1:825140/93‑1 (MQ=255)                                                                                                                                           |                                                                                                                                   TATACACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTTGTG  >  NC_000913/528854‑529122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑