| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,353,731 | T→C | Q107R (CAG→CGG) | yhcC ← | putative Fe‑S oxidoreductase, Radical SAM superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,353,731 | 0 | T | C | 100.0% | 278.3 / NA | 73 | Q107R (CAG→CGG) | yhcC | putative Fe‑S oxidoreductase, Radical SAM superfamily protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (35/38); total (35/38) | |||||||||||
GGCGGTTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCTC > NC_000913/3353604‑3353858 | ggCGGTTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc > 2:1481774/1‑139 (MQ=255)ggCGGTTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc > 2:628063/1‑139 (MQ=255)ggCGGTTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc > 1:111353/1‑139 (MQ=255) tttGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctgctg > 1:674402/1‑139 (MQ=255) tttGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctgctg < 2:144801/139‑1 (MQ=255) tttGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctgctg < 2:29217/139‑1 (MQ=255) tttGTACCCCCAGGCCCAGCCACACTTCTTAACCCTGCTCCTTATATTCGCAAAGCAGAACCGGCACCGCATCCAGCACGCAGTCCGGGCGGGTACCCACAAACAAACCGACAATATTGGCCCGGCTCACCGCcagctc < 2:363262/139‑2 (MQ=255) tGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGAt < 2:10680/139‑1 (MQ=255) cAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGaa > 1:1227316/1‑139 (MQ=255) cAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGaa > 2:1444460/1‑139 (MQ=255) cTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgc < 2:1004652/139‑1 (MQ=255) gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc > 2:1054767/1‑116 (MQ=255) gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc < 1:1054767/116‑1 (MQ=255) acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGaa > 1:953495/1‑139 (MQ=255) cGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTc > 2:259081/1‑139 (MQ=255) cccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa < 2:1061425/139‑1 (MQ=255) ccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa > 2:1409726/1‑139 (MQ=255) tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAgg < 1:336111/139‑1 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc > 2:1463303/1‑97 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc < 1:1463303/97‑1 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctg < 1:404275/99‑1 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctg > 2:404275/1‑99 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa > 2:590357/1‑134 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa < 1:743179/134‑1 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa < 1:590357/134‑1 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa > 2:743179/1‑134 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg > 1:1052611/1‑139 (MQ=255) gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg > 2:222350/1‑139 (MQ=255) tCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGc < 2:1057011/139‑1 (MQ=255) atTCGCAAATCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtata < 2:538794/139‑1 (MQ=255) atTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtata < 1:1409726/139‑1 (MQ=255) gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg < 1:140747/127‑1 (MQ=255) gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg > 2:140747/1‑127 (MQ=255) aaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGa < 2:111353/139‑1 (MQ=255) gCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGaaa < 2:674402/139‑1 (MQ=255) cAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAg < 2:205907/139‑1 (MQ=255) aGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGt < 1:549002/139‑1 (MQ=255) cAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGcc < 1:466776/139‑1 (MQ=255) gCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAg > 2:712577/1‑139 (MQ=255) aCCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGAt < 1:1444460/139‑1 (MQ=255) cGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGTCAATATTGGCCCGGCTCACCGcc > 1:1008498/1‑67 (MQ=255) cGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGcc < 2:1008498/67‑1 (MQ=255) gCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCttg < 2:1413512/68‑1 (MQ=255) gCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCttg > 1:1413512/1‑68 (MQ=255) gCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgca < 2:477786/85‑1 (MQ=255) gCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgca > 1:477786/1‑85 (MQ=255) cATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCg > 1:719942/1‑139 (MQ=255) cATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCg > 1:806136/1‑139 (MQ=255) cACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctg > 2:1147936/1‑60 (MQ=255) cACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCctg < 1:1147936/60‑1 (MQ=255) aCGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAgcgc < 1:259081/139‑1 (MQ=255) cGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGcgcg < 1:222350/139‑1 (MQ=255) gCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCgg < 2:771283/139‑1 (MQ=255) aGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGtt > 2:800709/1‑139 (MQ=255) tACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGAt > 2:1106104/1‑48 (MQ=255) tACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGAt < 1:1106104/48‑1 (MQ=255) tACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtata > 2:206714/1‑91 (MQ=255) tACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtata < 1:206714/91‑1 (MQ=255) acacacaAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa < 2:127489/73‑1 (MQ=255) acacacaAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa > 1:127489/1‑73 (MQ=255) acaAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCg > 2:1469480/1‑129 (MQ=255) acaAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCg < 1:1469480/129‑1 (MQ=255) acaAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTgcgc > 2:215682/1‑139 (MQ=255) aCCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgc > 1:1501583/1‑46 (MQ=255) aCCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgc < 2:1501583/46‑1 (MQ=255) aCAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCa > 2:377262/1‑60 (MQ=255) aCAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCa < 1:377262/60‑1 (MQ=255) aCAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCt < 2:277329/139‑1 (MQ=255) aCAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCt > 2:180443/1‑139 (MQ=255) aCAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCt > 1:277329/1‑139 (MQ=255) cAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCTc < 2:719942/139‑1 (MQ=255) tatTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCt < 2:321907/75‑1 (MQ=255) tatTGGCCCGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCt > 1:321907/1‑75 (MQ=255) | GGCGGTTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGCCTGAAAGTAGGCCAGATAGCGTTTAGCGCGGTTAACTAAATTCGCCTGGTGCGCCAGTTGCTC > NC_000913/3353604‑3353858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |