| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 420,175 | G→A | L195L (CTG→CTA) | brnQ → | branched‑chain amino acid transport system 2 carrier protein, LIV‑II transport system for Ile, Leu, and Val |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 420,175 | 0 | G | A | 100.0% | 86.3 / NA | 26 | L195L (CTG→CTA) | brnQ | branched‑chain amino acid transport system 2 carrier protein, LIV‑II transport system for Ile, Leu, and Val |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/15); total (11/15) | |||||||||||
CTGAAAATTATCGCGCTGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTGACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGA > NC_000913/420050‑420308 | cTGAAAATTATCGCGCTGGTCATCCTGTTTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGc > 2:564655/1‑139 (MQ=255) cgcgCTGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATg < 2:894545/139‑1 (MQ=255) tGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGtt < 1:564655/139‑1 (MQ=255) tGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGtt < 2:136101/139‑1 (MQ=255) tCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTgg < 1:134035/139‑1 (MQ=255) cATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGt < 2:129010/139‑1 (MQ=255) tGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCt < 1:360744/108‑1 (MQ=255) tGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCt > 2:360744/1‑108 (MQ=255) gCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCg > 2:88630/1‑130 (MQ=255) gCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCg < 1:88630/130‑1 (MQ=255) tGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCt < 1:651872/95‑1 (MQ=255) tGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCt > 2:651872/1‑95 (MQ=255) ggTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCg < 2:522657/139‑1 (MQ=255) gCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATg > 2:593669/1‑81 (MQ=255) gCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATg < 1:593669/81‑1 (MQ=255) gCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTc > 1:913045/1‑139 (MQ=255) aCGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGgtgt > 1:23112/1‑66 (MQ=255) aCGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGgtgt < 2:23112/66‑1 (MQ=255) aCGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGt < 2:913045/139‑1 (MQ=255) cGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTc > 1:714727/1‑139 (MQ=255) tGCGTTTTCTAACGGCTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTgg > 2:414645/1‑139 (MQ=255) cTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATgg > 2:47267/1‑137 (MQ=255) cTTCGTTAACGGCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATgg < 1:47267/137‑1 (MQ=255) ggCTATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTc < 1:414645/139‑1 (MQ=255) tATCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGa < 1:454451/139‑1 (MQ=255) tCTAACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGAc > 2:841621/1‑93 (MQ=255) | CTGAAAATTATCGCGCTGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTGACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGA > NC_000913/420050‑420308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |