| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,938,533 | C→T | R103W (CGG→TGG) | rbsR → | transcriptional repressor of ribose metabolism |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,938,533 | 0 | C | T | 100.0% | 101.8 / NA | 30 | R103W (CGG→TGG) | rbsR | transcriptional repressor of ribose metabolism |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (16/14); total (16/14) | |||||||||||
ATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTG > NC_000913/3938405‑3938653 | aTACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCg < 1:193605/139‑1 (MQ=255) cATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAAt < 2:300756/139‑1 (MQ=255) ggCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTgg > 2:235832/1‑139 (MQ=255) ttGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGc > 1:143386/1‑139 (MQ=255) ccAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCaaaa > 1:90865/1‑139 (MQ=255) aCCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCCAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAAcgcg > 1:525450/1‑139 (MQ=255) ttCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCt > 2:139294/1‑139 (MQ=255) ttCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTg > 1:351617/1‑139 (MQ=255) cAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGtt > 2:473422/1‑139 (MQ=255) aGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTa < 1:235832/139‑1 (MQ=255) aGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTa < 1:139294/139‑1 (MQ=255) tGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACtgtg < 2:143386/139‑1 (MQ=255) gTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCa > 2:214743/1‑139 (MQ=255) gTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCa > 1:79427/1‑139 (MQ=255) gTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGa < 1:473422/139‑1 (MQ=255) tGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGaa < 1:214743/139‑1 (MQ=255) tCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGa > 1:536194/1‑139 (MQ=255) cgcgGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATgg > 2:120762/1‑92 (MQ=255) cgcgGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATgg < 1:120762/92‑1 (MQ=255) tcGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTa < 1:56557/136‑1 (MQ=255) tcGTCCTTTGCAATACCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTa > 2:56557/1‑136 (MQ=255) aCCGAAGGCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACtg < 2:525450/139‑1 (MQ=255) ggCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAAc < 2:676922/49‑1 (MQ=255) ggCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAAc > 1:676922/1‑49 (MQ=255) ggCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGaa > 2:13062/1‑81 (MQ=255) ggCGATGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGaa < 1:13062/81‑1 (MQ=255) tGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACg > 1:653119/1‑108 (MQ=255) tGAACAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACg < 2:653119/108‑1 (MQ=255) aaCAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCt > 2:510557/1‑54 (MQ=255) aaCAGTGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCt < 1:510557/54‑1 (MQ=255) | ATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTG > NC_000913/3938405‑3938653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |