Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1640988	1641029	42	5 [2]	[1] 14	essQ/cspB	Qin prophage, putative S lysis protein/Qin prophage, cold shock protein

GATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCAC  >  NC_000913/1641029‑1641168  |                                                                                                                                           gATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTcacca   >  1:97875/1‑139 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                   <  1:253386/42‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                   <  1:25557/42‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                   >  2:253386/1‑42 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                   >  2:25557/1‑42 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTgg                                                                                           >  1:517477/1‑50 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTgg                                                                                           <  2:517477/50‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCAc                                                                        >  1:513580/1‑69 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCAc                                                                        <  2:513580/69‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCa           <  1:172275/130‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCa           >  2:172275/1‑130 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCa           <  2:342701/130‑1 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTcaccac  >  1:260818/1‑139 (MQ=255)  ataataAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCAGGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGct           >  1:342701/1‑129 (MQ=255)  |                                                                                                                                           GATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCAC  >  NC_000913/1641029‑1641168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑