| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,300,364 | G→A | A797V (GCC→GTC) | napA ← | nitrate reductase, periplasmic, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,300,364 | 0 | G | A | 100.0% | 19.0 / NA | 7 | A797V (GCC→GTC) | napA | nitrate reductase, periplasmic, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/3); total (4/3) | |||||||||||
TACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCG > NC_000913/2300268‑2300414 | tACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGACGTCGAAGAACGGCATg < 1:205563/114‑1 (MQ=255)tACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGACGTCGAAGAACGGCATg > 2:205563/1‑114 (MQ=255) ctcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGACGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACcg > 1:484439/1‑139 (MQ=255) cGTCAGTTTGTTAACCAACTGTGCGACGTCGAAGAACGGCATg < 1:268396/43‑1 (MQ=255) cGTCAGTTTGTTAACCAACTGTGCGACGTCGAAGAACGGCATg > 2:268396/1‑43 (MQ=255) gtgCGACGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCgg < 1:515653/43‑1 (MQ=255) gtgCGACGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCgg > 2:515653/1‑43 (MQ=255) | TACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCG > NC_000913/2300268‑2300414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |