| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,852,122 | G→A | G87S (GGC→AGC) | hypC → | hydrogenase maturation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,852,122 | 0 | G | A | 100.0% | 87.0 / NA | 26 | G87S (GGC→AGC) | hypC | hydrogenase maturation protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (14/12); total (14/12) | |||||||||||
CGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGA > NC_000913/2851990‑2852244 | cgcgTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAgg > 2:418518/1‑139 (MQ=255) gCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATcgc > 2:94688/1‑139 (MQ=255) taatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCTCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGc < 1:418518/139‑1 (MQ=255) gCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAAt > 2:48716/1‑139 (MQ=255) aGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGATTATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc < 1:94688/139‑1 (MQ=255) cgACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATcgcgcg > 1:345867/1‑105 (MQ=255) cgACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATcgcgcg < 2:345867/105‑1 (MQ=255) acTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGa > 2:152316/1‑139 (MQ=255) tctcGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAAc < 1:245264/139‑1 (MQ=255) cGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTg > 1:316762/1‑139 (MQ=255) tACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAt < 1:152316/139‑1 (MQ=255) aCAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc < 2:64389/115‑1 (MQ=255) aCAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc > 1:64389/1‑115 (MQ=255) gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCg < 1:386248/56‑1 (MQ=255) gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCg > 2:386248/1‑56 (MQ=255) gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTgcg < 2:527626/113‑1 (MQ=255) gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTgcg > 1:527626/1‑113 (MQ=255) tttGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATcg > 1:166998/1‑73 (MQ=255) tttGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATcg < 2:166998/73‑1 (MQ=255) aGCCGGATGTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGc > 1:491912/1‑139 (MQ=255) gTCGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCg < 2:491912/139‑1 (MQ=255) cGGCGCGCTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGa > 1:4973/1‑139 (MQ=255) gcTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCg < 2:446726/131‑1 (MQ=255) gcTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCg > 1:511636/1‑131 (MQ=255) gcTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCg < 2:511636/131‑1 (MQ=255) gcTGTTGTATAGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCg > 1:446726/1‑131 (MQ=255) | CGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGA > NC_000913/2851990‑2852244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |