Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,071,3000CT72.4% 347.7 / 174.0 229intergenic (+89/‑17)yeeP/isrCpseudogene, CP4‑44 prophage, 50S ribosome‑binding GTPase family,Phage or Prophage Related, putative histone/novel sRNA, CP4‑44, putative prophage remnant
Reads supporting (aligned to +/- strand):  ref base C (28/35);  new base T (76/89);  total (104/125)
Fisher's exact test for biased strand distribution p-value = 8.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 238 total aligned reads displayed.

GGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGA  >  NC_000913/2071166‑2071436
                                                                                                                                      |                                                                                                                                        
  tggtCTCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTaataat                                                                                                                                    <  1:639099/139‑1 (MQ=255)
              cccGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGa                                                                                                                        >  1:76170/1‑139 (MQ=255)
              cccGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGa                                                                                                                        <  2:763195/139‑1 (MQ=255)
               ccGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGAt                                                                                                                       <  2:205209/139‑1 (MQ=255)
                 gTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATGATAGAATAAAACGATCa                                                                                                                     <  1:273665/139‑1 (MQ=255)
                  tGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTACTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGa                                                                                                                        <  1:375659/135‑1 (MQ=255)
                    cGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAata                                                                                                                  <  1:499109/139‑1 (MQ=255)
                     ggTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCACTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATGAAACGATCAatat                                                                                                                 <  1:73668/139‑1 (MQ=255)
                       tATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCt                                                                                                               >  2:242694/1‑139 (MQ=255)
                           gAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCGCTCCCTGCCTCTGAGTCTGCTCACAAGAGCACTGTTTTCGTTACGGTATCTCGTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATAGCTAttt                                                                                                           <  1:161957/139‑1 (MQ=255)
                            aaCTGGATTTTCTTCTGAACCTGTCGTGACTGATG‑‑‑‑CCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  1:599804/139‑1 (MQ=255)
                               tGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTAATGTCTCTCTTGTCCGTGCAATAGATTAATAATAGAATAAAACGATCAATATCTATTTTatc                                                                                                       >  1:511435/1‑139 (MQ=255)
                                ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAATAACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTAGTTTatcg                                                                                                      <  1:787956/139‑1 (MQ=255)
                                ggATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  2:116004/139‑1 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTtaataa                                                                                                                                     >  2:370751/1‑107 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTtaataa                                                                                                                                     <  1:370751/107‑1 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATc                                                                                                                      >  2:424807/1‑122 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcga                                                                                                     >  1:48232/1‑139 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcga                                                                                                     >  1:670973/1‑139 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  2:336370/1‑138 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  1:443597/1‑138 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  2:443597/138‑1 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  2:378578/1‑138 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  1:336370/138‑1 (MQ=255)
                                 gATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  2:83568/138‑1 (MQ=255)
                                 gATTTTCTTCT‑AACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  1:381383/1‑137 (MQ=255)
                                  aTTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcgat                                                                                                    <  2:535298/139‑1 (MQ=255)
                                    tttCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcgatcg                                                                                                  <  1:222917/139‑1 (MQ=255)
                                     ttcttcTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAataata                                                                                                                                   >  1:46131/1‑105 (MQ=255)
                                     ttcttcTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAataata                                                                                                                                   <  2:46131/105‑1 (MQ=255)
                                      tcttctGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGtt                                                                                                >  2:732588/1‑139 (MQ=255)
                                           tGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  2:404761/128‑1 (MQ=255)
                                           tGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  1:404761/1‑128 (MQ=255)
                                           tGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTatat                                                                                           <  2:25711/139‑1 (MQ=255)
                                            gAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAat                                                                                                                   >  1:549506/1‑114 (MQ=255)
                                             aaCCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATatcg                                                                                         <  2:29032/139‑1 (MQ=255)
                                                  gTCGTGACTGATGCCCTCCCAGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGAGCGTTTATAtcgatcga                                                                                    >  2:543976/1‑139 (MQ=255)
                                                   tCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATcgatcgat                                                                                   >  1:61726/1‑139 (MQ=255)
                                                    cGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATa                                                                                  >  1:66280/1‑139 (MQ=255)
                                                       gccTGATGCACACCCTCACGCTGAGTCTGCTCACAAAAGCATTATTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                                               <  1:778771/137‑1 (MQ=255)
                                                       gACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                                               <  2:388451/139‑1 (MQ=255)
                                                        aCTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCt                                                                              <  2:611702/139‑1 (MQ=255)
                                                           gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGAt                                                                                                                       >  2:742868/1‑95 (MQ=255)
                                                           gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGAt                                                                                                                       <  1:742868/95‑1 (MQ=255)
                                                            aTGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaata                                                                          >  1:576519/1‑139 (MQ=255)
                                                             tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAat                                                                                                                   >  2:557601/1‑97 (MQ=255)
                                                             tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa                                                                         >  2:782519/1‑139 (MQ=255)
                                                             tGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa                                                                         >  2:272962/1‑139 (MQ=255)
                                                                  tccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATAtcgatcga                                                                                    <  1:525718/123‑1 (MQ=255)
                                                                      tGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATaaaa                                                                                                                           >  1:184368/1‑80 (MQ=255)
                                                                      tGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATaaaa                                                                                                                           <  2:184368/80‑1 (MQ=255)
                                                                       gACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGa                                                                                                                                 <  1:194283/73‑1 (MQ=255)
                                                                       gACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGa                                                                                                                                 >  2:194283/1‑73 (MQ=255)
                                                                       gACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCtttat                                                               <  1:564160/139‑3 (MQ=255)
                                                                        aCTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTc                                                              >  2:522171/1‑139 (MQ=255)
                                                                          tctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAg                                                            >  1:361115/1‑139 (MQ=255)
                                                                          tctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATcgatcgat                                                                                   >  2:309009/1‑116 (MQ=255)
                                                                          tctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATcgatcgat                                                                                   <  1:309009/116‑1 (MQ=255)
                                                                            tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataata                                                                       >  1:585757/1‑126 (MQ=255)
                                                                            tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTa                                                          <  2:576519/139‑1 (MQ=255)
                                                                              aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTtaataa                                                                                                                                     <  1:272861/62‑1 (MQ=255)
                                                                              aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATaaa                                                                                                                            >  2:510119/1‑71 (MQ=255)
                                                                              aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc                                                        >  2:13227/1‑139 (MQ=255)
                                                                              aGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAAc                                                        >  2:794422/1‑139 (MQ=255)
                                                                                  tGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGc                                                    >  1:802265/1‑139 (MQ=255)
                                                                                  tGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                                               <  2:172399/112‑1 (MQ=255)
                                                                                   gCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                                                   <  2:361115/139‑1 (MQ=255)
                                                                                   gCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                                                   <  2:49183/139‑1 (MQ=255)
                                                                                    cTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAataata                                                                                                                                   >  2:41687/1‑58 (MQ=255)
                                                                                    cTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCa                                                             >  2:64776/1‑128 (MQ=255)
                                                                                     tCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcaca                                                 <  2:62513/139‑1 (MQ=255)
                                                                                        caAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAatat                                                                                                                 <  2:318073/72‑1 (MQ=255)
                                                                                        caAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAatat                                                                                                                 >  1:318073/1‑72 (MQ=255)
                                                                                         aaaaGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATa                                             <  2:760918/139‑1 (MQ=255)
                                                                                           aaGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCCTTGTCAGTAACATGCACAGATACg                                           <  1:543976/139‑1 (MQ=255)
                                                                                             gCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTa                                         <  2:48232/139‑1 (MQ=255)
                                                                                              cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGGATAAAACGATCAATATCTATTTTatcg                                                                                                      <  1:424410/77‑1 (MQ=255)
                                                                                              cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAat                                                                                                                   <  1:772745/64‑1 (MQ=255)
                                                                                              cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTAc                                        >  2:476912/1‑139 (MQ=255)
                                                                                                   ttttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTtaataa                                                                                                                                     >  1:86725/1‑41 (MQ=255)
                                                                                                   ttttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                                               <  1:628589/95‑1 (MQ=255)
                                                                                                         ttACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACAtt                             <  2:382049/139‑1 (MQ=255)
                                                                                                           aCTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATg                                                     <  2:773448/113‑1 (MQ=255)
                                                                                                               tctctcTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGa                       >  1:121158/1‑139 (MQ=255)
                                                                                                                 tctctTGTCCGTGCAATAGCTTAATAATAGAATaaaa                                                                                                                           <  2:72158/37‑1 (MQ=255)
                                                                                                                 tctctTGTCCGTGCAATAGCTTAATAATAGAATaaaa                                                                                                                           >  1:72158/1‑37 (MQ=255)
                                                                                                                 tctctTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTa                                                          <  1:487486/102‑1 (MQ=255)
                                                                                                                         ccGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAg                >  2:671442/1‑136 (MQ=255)
                                                                                                                           gTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      <  1:10068/48‑1 (MQ=255)
                                                                                                                           gTGCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATGTCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACca           <  1:38641/139‑1 (MQ=255)
                                                                                                                           gTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTatcg                                                                                                      >  1:67557/1‑48 (MQ=255)
                                                                                                                           gTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACca           <  2:66280/139‑1 (MQ=255)
                                                                                                                           gTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACca           <  1:411787/139‑1 (MQ=255)
                                                                                                                            tGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                                                   <  2:589158/98‑1 (MQ=255)
                                                                                                                            tGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                                                   >  1:589158/1‑98 (MQ=255)
                                                                                                                             gCAATAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACAtt                             <  2:58312/119‑1 (MQ=255)
                                                                                                                               aaTAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGt                                                               >  1:45132/1‑83 (MQ=255)
                                                                                                                               aaTAGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGt                                                               <  2:45132/83‑1 (MQ=255)
                                                                                                                                  aGCTTAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAAACATTCAGGGAACAACAGAACCACAATTCa    <  2:315898/139‑1 (MQ=255)
                                                                                                                                    cTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGa  >  1:783408/1‑139 (MQ=255)
                                                                                                                                      |                                                                                                                                        
GGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGAACCTGTCGTGACTGATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGAACAACAGAACCACAATTCAGA  >  NC_000913/2071166‑2071436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑