| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,276,337 | G→A | R428C (CGC→TGC) | narX ← | sensory histidine kinase in two‑component regulatory system with NarL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,276,337 | 0 | G | A | 100.0% | 148.7 / NA | 44 | R428C (CGC→TGC) | narX | sensory histidine kinase in two‑component regulatory system with NarL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (17/27); total (17/27) | |||||||||||
GCAACTCGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCGGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGCTCTTCCATCACGATCAA > NC_000913/1276212‑1276466 | gCAACTCGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGc > 1:84921/1‑139 (MQ=255) aaCTCGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAg > 1:329411/1‑139 (MQ=255) cTCGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAgcg > 2:551831/1‑139 (MQ=255) cGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCa < 2:568884/139‑1 (MQ=255) gCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCAt < 2:703499/139‑1 (MQ=255) tCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGc < 1:350129/139‑1 (MQ=255) cAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGccc < 2:171909/139‑1 (MQ=255) gcgcCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTg < 2:63901/139‑1 (MQ=255) ccGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCAt < 2:479345/139‑1 (MQ=255) gTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCAt > 1:387320/1‑109 (MQ=255) gTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCAt < 2:387320/109‑1 (MQ=255) gTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCGGCa > 2:516263/1‑139 (MQ=255) tGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCTTTCAGTTCGTTACGGATCCGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCAt < 1:141931/139‑1 (MQ=255) tGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCAt < 1:434160/139‑1 (MQ=255) cAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATg < 2:329411/139‑1 (MQ=255) aaGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGc < 1:714398/139‑1 (MQ=255) gAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCACTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagag < 1:572033/139‑1 (MQ=255) aTGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagagag < 2:701573/139‑1 (MQ=255) ttCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATa < 2:660551/139‑1 (MQ=255) cgcCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGt > 2:779241/1‑139 (MQ=255) cccAGGATGCATTCAGTTGGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTc > 1:443978/1‑139 (MQ=255) ttCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCAt < 2:214458/65‑1 (MQ=255) ttCAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCAt > 1:214458/1‑65 (MQ=255) cAGTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAAtggtg < 1:368015/139‑1 (MQ=255) gTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCaa > 2:562366/1‑132 (MQ=255) gTTCGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCaa < 1:562366/132‑1 (MQ=255) cGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTACACAACTCACCTGCATCGTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGTACg < 1:516263/139‑1 (MQ=255) cGTTACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACg < 1:779241/139‑1 (MQ=255) ttACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGct > 1:543365/1‑139 (MQ=255) tACGGATCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGctc > 2:404285/1‑139 (MQ=255) aTCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTcgcg < 2:307918/116‑1 (MQ=255) aTCTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTcgcg > 1:307918/1‑116 (MQ=255) cTGACTTAACAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGCTCTTCCATc < 2:543365/139‑1 (MQ=255) aCAGTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGCTCTTCCATCACGATCaa < 1:398267/139‑1 (MQ=255) gTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTc < 2:707651/100‑1 (MQ=255) gTTCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTc > 1:707651/1‑100 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACt > 1:555603/1‑47 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACt < 2:555603/47‑1 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagag > 1:206216/1‑69 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagag < 1:503756/69‑1 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagag > 2:503756/1‑69 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAagag < 2:206216/69‑1 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTg > 2:774509/1‑77 (MQ=255) tCGCAGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTg < 1:774509/77‑1 (MQ=255) | GCAACTCGCCTCCAGCGCCGGACGTAATCCAGGCTCGGTGAGCTGCAAGCGGAATGTGGTGAGCAATTCACGCAACTGCGCCCAGGATGCATTCAGTTCGTTACGGATCTGACTTAACAGTTCGCGGCTGCTTTCTGGCAGCGCATCGCCCTGCATCTGTAAACAACTCACCTGCATCTTCATGCAAGAGAGAGATTGGGCAATAGAATCATGCAGTTCGCGCGCAATGGTGGCACGCTCTTCCATCACGATCAA > NC_000913/1276212‑1276466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |