| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 289,772 | C→T | A178A (GCG→GCA) | argF ← | ornithine carbamoyltransferase 2, chain F, CP4‑6 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 289,772 | 0 | C | T | 100.0% | 50.4 / NA | 16 | A178A (GCG→GCA) | argF | ornithine carbamoyltransferase 2, chain F, CP4‑6 prophage |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/8); total (8/8) | |||||||||||
TGCCGCCACGTCTTCCGTCAGAGTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGCGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAACGCCTTGCCCGGCAGGTGCTCCTGCATGGTCA > NC_000913/289643‑289878 | tGCCGCCACGTCTTCCGTCAGAGTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCAGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCt > 2:697504/1‑139 (MQ=255) ccgccACGTCTTCCGTCAGAGTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTc > 2:183176/1‑139 (MQ=255) agTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGc > 1:490732/1‑134 (MQ=255) agTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGc < 2:490732/134‑1 (MQ=255) agTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCAtg > 1:264398/1‑139 (MQ=255) gCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGa < 1:106861/139‑1 (MQ=255) cAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGAcc < 1:416851/139‑1 (MQ=255) cGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAg < 1:541271/88‑1 (MQ=255) cGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTa < 2:564690/139‑1 (MQ=255) cGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGAACCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAg > 2:541271/1‑88 (MQ=255) caccaGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAAc > 2:571887/1‑139 (MQ=255) ttCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAACGCCTTGCCCGGc < 1:350606/139‑1 (MQ=255) gCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTgcg > 1:142699/1‑85 (MQ=255) gCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTgcg < 2:142699/85‑1 (MQ=255) aTCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAACGCCTTGCCCGGCAGGTGCTCCTGCATGGtca < 1:395016/122‑1 (MQ=255) aTCCAGCCCGGTCAGTGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAACGCCTTGCCCGGCAGGTGCTCCTGCATGGtca > 2:395016/1‑122 (MQ=255) | TGCCGCCACGTCTTCCGTCAGAGTAATTTTCCCGCCGTGCTTCTCCGCCAGCGCGCTGCACTCCGCCACCAGGCTCTCTTCCGGCCAGCAGGCTTTCGGGGCCAACAGGCGCAGATCCAGCCCGGTCAGCGCCGCCGCTTCCAGCATCGAGTTGCCCATGTTGTTGCGCGCATCGCCCGCGTAGACCAGCGTCATCTCGTTAAACGCCTTGCCCGGCAGGTGCTCCTGCATGGTCA > NC_000913/289643‑289878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |