| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,061,729 | G→A | R69W (CGG→TGG) | nac ← | nitrogen assimilation regulon transcriptional regulator, autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,061,729 | 0 | G | A | 100.0% | 61.2 / NA | 19 | R69W (CGG→TGG) | nac | nitrogen assimilation regulon transcriptional regulator, autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (10/9); total (10/9) | |||||||||||
ATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCGCGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACTCACCTTCCAGTGTGGCAACCTGCTGGCTGAGCGCTGGTTGTGCGATATGCAA > NC_000913/2061603‑2061861 | ataaGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGtata < 2:48638/139‑1 (MQ=255) aTGGTGAAGGATGACGCAGCGGTTTCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCcacg > 2:426745/1‑121 (MQ=255) cTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGcc < 1:55976/139‑1 (MQ=255) aaaGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTa < 1:25756/127‑1 (MQ=255) aaaGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTa > 2:25756/1‑127 (MQ=255) aaaGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCttt > 2:429690/1‑139 (MQ=255) agaCTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCaa < 1:433780/139‑1 (MQ=255) gCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAgttg > 2:12254/1‑139 (MQ=255) ccGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGttgttg < 1:429690/139‑1 (MQ=255) gCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGTATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTa < 1:236027/114‑1 (MQ=255) gCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGTATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTa > 2:236027/1‑114 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGTATTTTTCCGGCGTCTGTTTGTGTAACGCCCCGCTTTGTACGGATCAAAAG‑TGTTGATTTAACTCACCtt > 1:404856/1‑139 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGcc > 2:349971/1‑99 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGcc < 1:349971/99‑1 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACt > 1:527235/1‑134 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACt < 2:527235/134‑1 (MQ=255) aCCAACGTTATGCACCGCCAGTTGGGCCTGATCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACTCACCt > 1:601706/1‑139 (MQ=255) cGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACTCACCTTCCAGTGTGGCAAcc > 2:589422/1‑139 (MQ=255) gCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAGGTTGTTGATTTAACTCACCTTCCAGTGTGGCAACCTGCTGGCTGAGCGCTGGTTGTGCGATATGCaa > 2:405256/1‑137 (MQ=255) gCCCACGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACTCACCTTCCAGTGTGGCAACCTGCTGGCTGAGCGCTGGTTGTGCGATATGCaa < 1:405256/137‑1 (MQ=255) | ATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCGCGCATGGGTATAGAGAATTTTTCCGGCGTCTGTTGGTGTAACGCCCCGCTTTGTACGGATCAAAAGTTGTTGATTTAACTCACCTTCCAGTGTGGCAACCTGCTGGCTGAGCGCTGGTTGTGCGATATGCAA > NC_000913/2061603‑2061861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |