| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,542,393 | G→A | A40A (GCC→GCT) | cysU ← | sulfate/thiosulfate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,542,393 | 0 | G | A | 100.0% | 96.0 / NA | 28 | A40A (GCC→GCT) | cysU | sulfate/thiosulfate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (16/12); total (16/12) | |||||||||||
GCCATCAGCAGACCGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGGGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATCAGTT > NC_000913/2542268‑2542517 | gCCATCAGCAGACCGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGt > 2:343079/1‑132 (MQ=255)gCCATCAGCAGACCGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGt < 1:343079/132‑1 (MQ=255) tCAGCAGACCGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAg > 1:56473/1‑139 (MQ=255) ccGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCa < 2:14703/127‑1 (MQ=255) ccGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCa > 1:14703/1‑127 (MQ=255) aTCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCa > 2:185568/1‑139 (MQ=255) caAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGcac < 1:74464/134‑1 (MQ=255) caAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGcac > 2:74464/1‑134 (MQ=255) gCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAAcagca < 1:185568/139‑1 (MQ=255) tAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAgg > 1:682528/1‑139 (MQ=255) cgcgACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGagag < 2:510042/81‑1 (MQ=255) cgcgACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGagag > 1:510042/1‑81 (MQ=255) cgcgACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCgg < 2:291393/84‑1 (MQ=255) cgcgACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCgg > 1:291393/1‑84 (MQ=255) tGATCACCTCCCAGTACTGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTgga < 1:640931/139‑1 (MQ=255) tGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGgc < 1:357440/48‑1 (MQ=255) tGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGgc > 2:357440/1‑48 (MQ=255) tGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCg > 1:681897/1‑87 (MQ=255) tGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCg < 2:681897/87‑1 (MQ=255) tGCGCCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATCa > 1:325124/1‑139 (MQ=255) gcgcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGgaggag < 1:628903/125‑1 (MQ=255) gcgcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGgaggag > 2:628903/1‑125 (MQ=255) cgcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCTAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCTCGCGTCTGGAGGAGACAGCAAACATCAGt > 2:472612/1‑139 (MQ=255) cgcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATc > 2:581419/1‑136 (MQ=255) cgcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATc < 1:581419/136‑1 (MQ=255) gcCCAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATCAGtt > 2:162012/1‑139 (MQ=255) cAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCAcg > 1:56465/1‑108 (MQ=255) cAGCTCATCTGAGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCAcg < 2:56465/108‑1 (MQ=255) | GCCATCAGCAGACCGAAAACGCCGTTAAAAATCGATGCCACAAACGCCGACAGCAGCGTTACTTTGTAGGCCGCGACCACCTGCGGGTTGGTGATCACCTCCCAGTACTGCGCCCAGCTCATCTGGGCCAGTTGCATCACCAGCGCGGAGAGCGGCAGCAGCAAAATCAGGCACACAAACAGCAGACTGGTGCCGAGGCTTAAGGTAAAGCCCGGCAGCACGCGTCTGGAGGAGACAGCAAACATCAGTT > NC_000913/2542268‑2542517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |