| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,151,929 | G→A | intergenic (+78/‑10) | acpP → / → fabF | acyl carrier protein (ACP)/3‑oxoacyl‑[acyl‑carrier‑protein] synthase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,151,929 | 0 | G | A | 100.0% | 55.8 / NA | 18 | intergenic (+78/‑10) | acpP/fabF | acyl carrier protein (ACP)/3‑oxoacyl‑[acyl‑carrier‑protein] synthase II |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/9); total (9/9) | |||||||||||
TTCAGGCTGCCATTGATTACATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGGAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCA > NC_000913/1151811‑1152041 | ttCAGGCTGCCATTGATTACATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGcg < 2:304952/139‑1 (MQ=255) cATTGATTACATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGtt > 1:465260/1‑139 (MQ=255) aTTACATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGAc < 1:546981/139‑1 (MQ=255) aCATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCgg < 2:465260/139‑1 (MQ=255) cATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTtg < 1:445963/131‑1 (MQ=255) cATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTtg > 2:445963/1‑131 (MQ=255) cGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGc > 1:360767/1‑139 (MQ=255) ggTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCCGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGAc > 1:439392/1‑102 (MQ=255) ggTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCCGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGAc < 2:439392/102‑1 (MQ=255) tCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAAc < 2:545341/69‑1 (MQ=255) tCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAAc > 1:369575/1‑69 (MQ=255) tCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAAc > 1:545341/1‑69 (MQ=255) tCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAAc < 2:369575/69‑1 (MQ=255) tCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGt < 1:12/67‑1 (MQ=255) tCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGt > 2:12/1‑67 (MQ=255) cACTAGAATCATTTTTTCCCTCCCTGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCa > 1:553657/1‑139 (MQ=255) ccctGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCgg > 2:234494/1‑68 (MQ=255) ccctGAAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCgg < 1:234494/68‑1 (MQ=255) | TTCAGGCTGCCATTGATTACATCAACGGCCACCAGGCGTAAGTGAACATCTCCAGGCGGTCGTTCGACCGCCTGAGTTTTATCTTTTTGTCCCACTAGAATCATTTTTTCCCTCCCTGGAGGACAAACGTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCA > NC_000913/1151811‑1152041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |