Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,090,3800GA51.7% 9.5 / inf 209M63I (ATG→ATA) hisGATP phosphoribosyltransferase
Reads supporting (aligned to +/- strand):  ref base G (54/47);  new base A (58/50);  total (112/97)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.79e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 222 total aligned reads displayed.

GTGATGACTCACGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCTTTCGCT  >  NC_000913/2090244‑2090514
                                                                                                                                        |                                                                                                                                      
      aCTCACGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGt                                                                                                                                >  2:496834/1‑139 (MQ=255)
         cACGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGt                                                                                                                             <  2:663250/139‑1 (MQ=255)
          aCGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatggatg                                                                                                                                    >  2:404230/1‑131 (MQ=255)
          aCGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTa                                                                                                                            <  1:1288598/139‑1 (MQ=255)
          aCGCGAATTGCTGGCGCGCTGTGGCATT‑AAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatagatgg                                                                                                                                   <  1:1017322/131‑1 (MQ=255)
                aTTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCtt                                                                                                                      <  1:216225/139‑1 (MQ=255)
                      ggCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTa                                                                                                                            >  2:1123130/1‑127 (MQ=255)
                          cgcTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatagatg                                                                                                                                    >  2:1072516/1‑115 (MQ=255)
                          cgcTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatagatg                                                                                                                                    <  1:1072516/115‑1 (MQ=255)
                          cgcTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCg                                                                                                            >  1:575110/1‑139 (MQ=255)
                            cTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGt                                                                                                                             <  1:28748/120‑1 (MQ=255)
                                 gCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGaaaa                                                                                                     >  1:896130/1‑139 (MQ=255)
                                    ttAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGt                                                                                                  <  2:290717/139‑1 (MQ=255)
                                    ttAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGt                                                                                                  >  2:1689163/1‑139 (MQ=255)
                                               cTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGaagaag                                                                                       <  2:324851/139‑1 (MQ=255)
                                                  cacaCCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTg                                                                                                 >  1:1459451/1‑126 (MQ=255)
                                                  cacaCCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTg                                                                                                 <  2:1459451/126‑1 (MQ=255)
                                                  cacaCCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAgc                                                                                    >  2:175644/1‑139 (MQ=255)
                                                         aGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTaa                                                                             >  2:788581/1‑139 (MQ=255)
                                                         aGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGt                                                                                                                             >  1:343590/1‑91 (MQ=255)
                                                         aGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTaa                                                                             >  1:1392100/1‑139 (MQ=255)
                                                          gcgcCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTTCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGGTGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAc                                                                            >  1:772276/1‑139 (MQ=255)
                                                          gcgcCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAc                                                                            >  1:1171370/1‑139 (MQ=255)
                                                          gcgcCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAc                                                                            >  1:1638207/1‑139 (MQ=255)
                                                          gcgcCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAc                                                                            >  1:272025/1‑139 (MQ=255)
                                                           cgcCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAcc                                                                           >  1:623450/1‑139 (MQ=255)
                                                             ccTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAccgc                                                                         <  2:623450/139‑1 (MQ=255)
                                                             ccTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAccgc                                                                         <  1:1129308/139‑1 (MQ=255)
                                                                 aTCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGt                                                                                                                             <  2:146660/83‑1 (MQ=255)
                                                                 aTCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCtt                                                                                                                      >  1:1028307/1‑90 (MQ=255)
                                                                 aTCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCcgcg                                                                     >  1:1269923/1‑139 (MQ=255)
                                                                 aTCGCGATGGCAGAAAACATGCCGATTAATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTAGAAGAAGAGCTGCTTAACCGCcgcg                                                                     >  2:1154084/1‑139 (MQ=255)
                                                                   cgcgATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGcc                                                                   <  2:278013/139‑1 (MQ=255)
                                                                    gcgATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGccc                                                                  <  1:175644/139‑1 (MQ=255)
                                                                     cgATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTACCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCa                                                                 >  1:715442/1‑139 (MQ=255)
                                                                       aTGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGc                                                                                                >  1:1015076/1‑106 (MQ=255)
                                                                           cAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCa                                                                 <  1:1708443/133‑1 (MQ=255)
                                                                           cAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGa                                                           >  2:1512147/1‑139 (MQ=255)
                                                                                  cATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCa                                                    <  2:1440746/139‑1 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGaaaa                                                                                                     <  1:1347930/88‑1 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGaaaa                                                                                                     >  2:1347930/1‑88 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  <  2:715442/139‑1 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGcc                                                                   <  1:1720165/122‑1 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  <  1:735534/139‑1 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  >  1:1003045/1‑139 (MQ=255)
                                                                                    tGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  <  1:670226/139‑1 (MQ=255)
                                                                                     gCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatggatg                                                                                                                                    >  2:30734/1‑56 (MQ=255)
                                                                                     gCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAatggatg                                                                                                                                    <  1:30734/56‑1 (MQ=255)
                                                                                         aTTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACt                                             <  2:1269923/139‑1 (MQ=255)
                                                                                          ttGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCAc                                                   <  1:1329165/132‑1 (MQ=255)
                                                                                                   tGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAgc                                                                                    <  1:429289/90‑1 (MQ=255)
                                                                                                   tGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAagaaga                                                                                      <  1:1681126/88‑1 (MQ=255)
                                                                                                   tGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAagaaga                                                                                      >  2:1681126/1‑88 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGt                                                                                                                             >  2:1215134/1‑47 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGt                                                                                                                             <  1:985301/47‑1 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGt                                                                                                                             <  1:1215134/47‑1 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGaagaag                                                                                       <  2:217575/85‑1 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAccgcc                                                                        >  2:767781/1‑100 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtc                                 >  1:1105445/1‑139 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCATGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGA‑‑‑GCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCgtcgtc                              >  1:1617376/1‑139 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGaaa                                                                                                      <  2:1210915/70‑1 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGt                                                                                                  >  2:1255818/1‑74 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAccgc                                                                         <  2:1558146/99‑1 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAccgc                                                                         >  1:1558146/1‑99 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtc                                 >  2:551113/1‑139 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtc                                 >  2:885875/1‑139 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtc                                 >  1:854104/1‑139 (MQ=255)
                                                                                                     cgcgTGCGTGACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtc                                 >  2:1014035/1‑139 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAatggatgg                                                                                                                                   >  2:184084/1‑39 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  <  2:7441/120‑1 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  <  1:1748734/120‑1 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  >  2:1748734/1‑120 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtcgt                               >  1:1495043/1‑139 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGcc                                                                   >  1:1780730/1‑103 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGcgtcgt                               >  1:1521439/1‑139 (MQ=255)
                                                                                                       cgtgcgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGATGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACGTTACCCTGcgtcgt                               >  2:1094246/1‑139 (MQ=255)
                                                                                                         tgcgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCgcgc                                                                    >  2:1594170/1‑100 (MQ=255)
                                                                                                         tgcgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCgcgc                                                                    <  1:1594170/100‑1 (MQ=255)
                                                                                                          gcgtgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGt                                                                                                                             <  2:844862/42‑1 (MQ=255)
                                                                                                           cgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGcc                                                                   >  1:838542/1‑99 (MQ=255)
                                                                                                           cgtgACGACGACATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTgg                           <  2:1003045/139‑1 (MQ=255)
                                                                                                             tgACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAgc                                                                                    <  2:242204/80‑1 (MQ=255)
                                                                                                                  acgacATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTcgg                    <  1:885875/139‑1 (MQ=255)
                                                                                                                   tctattacccGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTcggc                   >  2:1022639/8‑139 (MQ=255)
                                                                                                                     acATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTcggcgg                 <  2:1657326/139‑1 (MQ=255)
                                                                                                                     acATTCCCGGTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTcggcgg                 <  1:1094246/139‑1 (MQ=255)
                                                                                                                         tCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTg              <  1:186825/138‑1 (MQ=255)
                                                                                                                             ggTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCgcgc                                                                    >  1:143975/1‑80 (MQ=255)
                                                                                                                             ggTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCgcgc                                                                    <  2:143975/80‑1 (MQ=255)
                                                                                                                             ggTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGc                                                                                                <  2:1015529/52‑1 (MQ=255)
                                                                                                                              gTCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCt        >  2:1051140/1‑139 (MQ=255)
                                                                                                                               tCTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCtt       <  2:947512/139‑1 (MQ=255)
                                                                                                                                cTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGcc                                                                   <  2:469448/78‑1 (MQ=255)
                                                                                                                                cTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACg                                                  >  1:551607/1‑95 (MQ=255)
                                                                                                                                cTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAagag                                                                                     <  2:1712180/60‑1 (MQ=255)
                                                                                                                                cTGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTcggcgg                 >  1:49111/1‑128 (MQ=255)
                                                                                                                                 tGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAAcc                                                                           <  2:90132/69‑1 (MQ=255)
                                                                                                                                 tGGTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCcgcg                                                                     <  1:749711/75‑1 (MQ=255)
                                                                                                                                  ggTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCTTTCg    <  2:197668/139‑1 (MQ=255)
                                                                                                                                   gTAATAGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCAGCTTAACCGCCGCGcc                                                                   <  1:222542/75‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                      
GTGATGACTCACGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCTTTCGCT  >  NC_000913/2090244‑2090514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑