Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	6,903	T→C	T353A (ACC→GCC)	yaaJ ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	6,903	0	T	C	100.0%	294.0 / NA	78	T353A (ACC→GCC)	yaaJ	putative transporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/40);  total (38/40)

CGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCA  >  NC_000913/6777‑7037                                                                                                                               |                                                                                                                                       cGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGCCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGc                                                                                                                            <  1:1033010/139‑1 (MQ=255)             tCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAAcc                                                                                                                >  2:179181/1‑139 (MQ=255)              ccGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGTAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAAccc                                                                                                               >  2:557860/1‑139 (MQ=255)                        cAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCAccc                                                                                                     >  1:1354747/1‑139 (MQ=255)                        cAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCAccc                                                                                                     >  1:1563038/1‑139 (MQ=255)                            tCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGTAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCAt                                                                                                 <  1:557860/139‑1 (MQ=255)                                  tAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCtt                                                                                           <  2:333142/139‑1 (MQ=255)                                        tgttCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGAt                                                                                     <  1:429005/139‑1 (MQ=255)                                        tgttCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGAt                                                                                     >  2:1668810/1‑139 (MQ=255)                                          ttCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATaa                                                                                   >  1:1190020/1‑139 (MQ=255)                                            cAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGc                                                                                 <  2:1190020/139‑1 (MQ=255)                                             aGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCt                                                                                <  2:1235316/139‑1 (MQ=255)                                                 gTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAg                                                                                                                     >  2:721768/1‑98 (MQ=255)                                                 gTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAg                                                                                                                     <  1:721768/98‑1 (MQ=255)                                                   aaaaaGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATAc                                                                          <  2:820295/139‑1 (MQ=255)                                                    aaaaGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATc                                                                                                >  2:437959/1‑116 (MQ=255)                                                    aaaaGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATc                                                                                                <  1:437959/116‑1 (MQ=255)                                                    aaaaGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATAcc                                                                         >  2:709121/1‑139 (MQ=255)                                                          agagATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACCAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAg                                                                   <  1:1217239/139‑1 (MQ=255)                                                           gagaTTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGc                                                                  <  2:515566/139‑1 (MQ=255)                                                             gaTTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAg                                                                                                                             <  2:1420417/78‑1 (MQ=255)                                                             gaTTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAg                                                                                                                             >  1:1420417/1‑78 (MQ=255)                                                             gaTTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCgg                                                                >  2:1104274/1‑139 (MQ=255)                                                                tGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAg                                                                                                                             >  2:1142750/1‑75 (MQ=255)                                                                tGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAg                                                                                                                             <  1:1142750/75‑1 (MQ=255)                                                                       ggCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCa                                                                                                  <  2:945337/95‑1 (MQ=255)                                                                       ggCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCa                                                                                                  >  1:945337/1‑95 (MQ=255)                                                                       ggCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGaa                                                                             <  1:347345/116‑1 (MQ=255)                                                                       ggCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGaa                                                                             >  2:347345/1‑116 (MQ=255)                                                                       ggCATAAATGTAGTTGGC‑ACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCAtt                                                                                                            >  1:715555/1‑84 (MQ=255)                                                                       ggCATAAATGTAGTTGGC‑ACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCAtt                                                                                                            <  2:715555/84‑1 (MQ=255)                                                                        gCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTc                                                                                          >  2:125637/1‑102 (MQ=255)                                                                        gCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTc                                                                                          <  1:125637/102‑1 (MQ=255)                                                                         cATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGc                                                                  <  1:1563558/125‑1 (MQ=255)                                                                         cATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGc                                                                  >  2:1563558/1‑125 (MQ=255)                                                                            aaaTGTAGTTGGCAACGATGGAGCTGAAGGCACACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATg                                                            >  1:1060927/1‑128 (MQ=255)                                                                            aaaTGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCATCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATg                                                            <  2:1060927/128‑1 (MQ=255)                                                                            aaaTGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGcc                                                 >  2:1570234/1‑139 (MQ=255)                                                                                gTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTa                                             <  2:142783/139‑1 (MQ=255)                                                                                    ttGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCg                                         <  2:241018/139‑1 (MQ=255)                                                                                    ttGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCg                                         <  1:1570234/139‑1 (MQ=255)                                                                                      ggCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTAccc                                          >  2:1658200/1‑136 (MQ=255)                                                                                      ggCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTAccc                                          <  1:1658200/136‑1 (MQ=255)                                                                                      ggCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGcc                                       >  2:745362/1‑139 (MQ=255)                                                                                        cAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAg                                     >  2:1698472/1‑139 (MQ=255)                                                                                        cAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAg                                     >  2:672658/1‑139 (MQ=255)                                                                                        cAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAg                                     >  1:210653/1‑139 (MQ=255)                                                                                         aaCGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGt                                    >  2:588985/1‑139 (MQ=255)                                                                                         aaCGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGt                                    <  1:588985/139‑1 (MQ=255)                                                                                         aaCGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGt                                    >  1:1155413/1‑139 (MQ=255)                                                                                           cGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAGCCCATTAGCACCCGCATCGCCTTCTGGATa                                                                                    >  1:795708/1‑89 (MQ=255)                                                                                           cGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAGCCCATTAGCACCCGCATCGCCTTCTGGATa                                                                                    <  2:795708/89‑1 (MQ=255)                                                                                           cGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTc                                                                                          >  2:1722872/1‑83 (MQ=255)                                                                                           cGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTc                                                                                          <  1:1722872/83‑1 (MQ=255)                                                                                              tGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAatat                               >  2:157985/1‑139 (MQ=255)                                                                                              tGGAGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAatat                               <  1:709121/139‑1 (MQ=255)                                                                                                 aGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAgg                                                        >  1:956654/1‑111 (MQ=255)                                                                                                 aGCTGAAGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAgg                                                        <  2:956654/111‑1 (MQ=255)                                                                                                      aaGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAg                                                                                  <  2:730511/80‑1 (MQ=255)                                                                                                      aaGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAg                                                                                  >  1:730511/1‑80 (MQ=255)                                                                                                       aGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGgc                      <  1:745362/139‑1 (MQ=255)                                                                                                       aGGCAAACAGAATAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGgc                      <  2:903185/139‑1 (MQ=255)                                                                                                                   tAACCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACa          <  2:1155413/139‑1 (MQ=255)                                                                                                                    aaCCACAAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAg         <  1:1668810/139‑1 (MQ=255)                                                                                                                         caAGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGAc    <  1:672658/139‑1 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAg                                                                   >  2:601054/1‑75 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAg                                                                   <  1:601054/75‑1 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCg                                         >  2:990825/1‑101 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTg                 >  1:759360/1‑125 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTg                 <  2:759360/125‑1 (MQ=255)                                                                                                                          aaGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGCAGGTTGTGCCGTTACCCg                                         <  1:990825/101‑1 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCtt                                                                                           >  2:305963/1‑50 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCtt                                                                                           <  1:305963/50‑1 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCt                                                                                            >  2:1247587/1‑49 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCt                                                                                            <  1:1247587/49‑1 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTa            >  2:575516/1‑129 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTa            <  1:575516/129‑1 (MQ=255)                                                                                                                           aGGGCAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCa  >  2:40408/1‑139 (MQ=255)                                                                                                                               |                                                                                                                                       CGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCA  >  NC_000913/6777‑7037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑