Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,465,279 | T→C | intergenic (‑272/‑22) | mlaA ← / → yfdC | ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component/putative inner membrane protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,465,279 | 0 | T | C | 100.0% | 257.8 / NA | 68 | intergenic (‑272/‑22) | mlaA/yfdC | ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component/putative inner membrane protein |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (33/35); total (33/35) |
CATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCC > NC_000913/2465144‑2465405 | cATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCt < 2:1285128/139‑1 (MQ=255) cATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCt > 2:1359716/1‑139 (MQ=255) ccTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTc > 2:1219834/1‑139 (MQ=255) ccTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTc > 2:820308/1‑139 (MQ=255) ccTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGC‑‑TACGCGCTAATTCaa > 1:145781/1‑139 (MQ=255) ggTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTAGATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaag > 1:1044029/1‑139 (MQ=255) ggTAATCGCCG‑CCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaaga > 2:1565493/1‑139 (MQ=255) gTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaaga > 2:1642704/1‑139 (MQ=255) tCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaag < 1:1207435/139‑1 (MQ=255) tCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaag < 2:1082157/139‑1 (MQ=255) tCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaag < 1:1359716/139‑1 (MQ=255) tCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaag < 1:820308/139‑1 (MQ=255) gccgccCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaagag > 2:1053439/1‑139 (MQ=255) gccCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGAcc < 2:746870/139‑1 (MQ=255) tAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGAc > 1:713019/1‑139 (MQ=255) ggCTACTTGATTCCATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGATCATAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACaa < 1:1180379/139‑1 (MQ=255) aCTTGATTCTTTAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGAc > 1:685254/1‑139 (MQ=255) cTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACa > 1:358179/1‑139 (MQ=255) ttGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaa > 1:131331/1‑139 (MQ=255) gATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa > 1:1598702/1‑139 (MQ=255) gATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa < 2:1259319/139‑1 (MQ=255) gATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa > 1:625490/1‑139 (MQ=255) gATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa < 1:1053439/139‑1 (MQ=255) tataGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaa > 1:1646169/1‑132 (MQ=255) tataGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaa < 2:1646169/132‑1 (MQ=255) tataGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGAt < 1:1206511/139‑1 (MQ=255) taGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCa > 1:618887/1‑139 (MQ=255) aaaCAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAaca < 2:586217/139‑1 (MQ=255) aCAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAAcaca > 1:1170988/1‑139 (MQ=255) aaaaaGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGa < 2:1237685/118‑1 (MQ=255) aaaaaGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGa > 1:1237685/1‑118 (MQ=255) aaGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGcgacga < 2:618887/139‑1 (MQ=255) ggCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGaaa < 1:1642704/139‑1 (MQ=255) aCGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGaa > 2:188905/1‑139 (MQ=255) ttttCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGagag < 2:131331/139‑1 (MQ=255) ttCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg < 2:124972/139‑1 (MQ=255) ttCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg < 2:1598702/139‑1 (MQ=255) ttCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg < 2:1044029/139‑1 (MQ=255) ttCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg < 1:155964/139‑1 (MQ=255) tCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACATAATTGATCAACACAGcga < 1:992866/118‑1 (MQ=255) tCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGcga > 2:992866/1‑118 (MQ=255) tCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCga > 1:1730309/1‑139 (MQ=255) aTTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGcgacga > 2:867605/1‑116 (MQ=255) aTTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGcgacga < 1:867605/116‑1 (MQ=255) aCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCa < 1:1131317/139‑1 (MQ=255) cTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa < 2:1711102/84‑1 (MQ=255) cTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACaaaa > 1:1711102/1‑84 (MQ=255) cTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaa > 1:868892/1‑139 (MQ=255) gTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCa < 2:1382355/64‑1 (MQ=255) gTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCa > 1:1382355/1‑64 (MQ=255) gTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaaaa > 2:808701/1‑139 (MQ=255) gTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaataga < 2:1730309/139‑1 (MQ=255) ttGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaaga < 2:1263470/54‑1 (MQ=255) ttGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaagagaaga > 1:1263470/1‑54 (MQ=255) tGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaaa < 2:358179/139‑1 (MQ=255) cGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaa < 1:545359/44‑1 (MQ=255) cGAGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCaa > 2:545359/1‑44 (MQ=255) aGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGAt < 1:607843/74‑1 (MQ=255) aGCAAAAAAGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGAt > 2:607843/1‑74 (MQ=255) aaaaaaGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGa < 2:685254/139‑1 (MQ=255) aaaaGCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAg > 1:1020236/1‑139 (MQ=255) gCCGCTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCg < 2:1170988/139‑1 (MQ=255) cTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCga < 1:761717/93‑1 (MQ=255) cTACGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCga > 2:761717/1‑93 (MQ=255) aCGCTTTAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGActccc > 2:1416273/1‑139 (MQ=255) tttAGCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGTGCGGCAAAAAAATAGAAATAGATGAAGACCGActcccctcc < 1:1565493/139‑1 (MQ=255) gCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg > 1:1481047/1‑82 (MQ=255) gCTATACGCGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCg < 2:1481047/82‑1 (MQ=255) | CATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCC > NC_000913/2465144‑2465405 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |