Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,419,721 (G)7→8 intergenic (‑265/+44) ydaG ← / ← racR Rac prophage, uncharacterized protein/Rac prophage, putative DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,419,7141.G100.0% 265.2 / NA 72intergenic (‑258/+51)ydaG/racRRac prophage, uncharacterized protein/Rac prophage, putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (39/33);  total (39/33)

ATTGCCCGGCGTTCTGTGGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCAT  >  NC_000913/1419584‑1419845
                                                                                                                                   |                                                                                                                                    
aTTGCCCGGCGTTCTGTGGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATgggggggg                                                                                                                              <  2:1149815/139‑2 (MQ=255)
aTTGCCCGGCGTTCTGTGGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATgggggggg                                                                                                                              <  1:56494/139‑2 (MQ=255)
aTTGCCCGGCGTTCTGTGGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATgggggggg                                                                                                                              <  2:1202506/139‑2 (MQ=255)
              tgtgGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATaa                                                                                                                       >  1:337576/1‑133 (MQ=255)
              tgtgGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATaa                                                                                                                       <  2:337576/133‑1 (MQ=255)
              tgtgGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAAt                                                                                                                 >  2:714848/1‑139 (MQ=255)
               gtgGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATc                                                                                                                <  1:421899/139‑1 (MQ=255)
                        ggtgggtgGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGttt                                                                                                       <  2:834245/139‑1 (MQ=255)
                               ggtATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCa                                                                                                <  2:617646/139‑1 (MQ=255)
                                gtATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               <  1:868926/139‑1 (MQ=255)
                                        gAACTATAGGTACTGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  <  1:157464/128‑1 (MQ=255)
                                        gAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGGTGGGGGGGGGTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  >  2:157464/1‑128 (MQ=255)
                                        gAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               <  1:1435915/131‑1 (MQ=255)
                                        gAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               >  2:1435915/1‑131 (MQ=255)
                                        gAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCAtata                                                                                       <  1:151788/139‑1 (MQ=255)
                                           cTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGaa                                                                                                                  <  1:1184700/109‑1 (MQ=255)
                                           cTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGaa                                                                                                                  >  2:1184700/1‑109 (MQ=255)
                                           cTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATAtaagt                                                                                    >  1:92443/1‑139 (MQ=255)
                                                ggTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATAtaagtttaag                                                                               >  2:866166/1‑139 (MQ=255)
                                                ggTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATAtaagtttaag                                                                               >  2:97769/1‑139 (MQ=255)
                                                   aaTGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCatat                                                                                        <  1:1200802/127‑1 (MQ=255)
                                                   aaTGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCatat                                                                                        >  2:1200802/1‑127 (MQ=255)
                                                    aTGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGAACATATAAGTTTAAGTTcc                                                                           >  1:1001443/1‑139 (MQ=255)
                                                     tGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCa                                                                          >  2:1335998/1‑139 (MQ=255)
                                                     tGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCa                                                                          >  1:1038386/1‑139 (MQ=255)
                                                        cTAAATGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTACGTTCCAGtt                                                                      >  2:368375/1‑139 (MQ=255)
                                                          aaTTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGtttt                                                                    >  2:518172/1‑139 (MQ=255)
                                                              gattgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                <  1:518172/139‑1 (MQ=255)
                                                              gattgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                <  2:92443/139‑1 (MQ=255)
                                                                 tgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGGTGGGGGGGGGTAAAAAACCGGATTCAGGAGTTTTTCGTTCGGCCATAAAAAGTTTAGTTCCAGGTTTTtgtatg                                                              >  2:1108082/1‑136 (MQ=255)
                                                                 tgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               <  2:915350/106‑1 (MQ=255)
                                                                 tgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATg                                                             >  1:1012749/1‑139 (MQ=255)
                                                                 tgTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGAAGGCGACAGCAGAAAGTGCTGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               >  1:915350/1‑106 (MQ=255)
                                                                             aTGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACg                                                                                                                     >  2:48944/1‑72 (MQ=255)
                                                                             aTGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACg                                                                                                                     <  1:48944/72‑1 (MQ=255)
                                                                             aTGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGt                                                            <  1:1344757/128‑1 (MQ=255)
                                                                             aTGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGt                                                            >  2:1344757/1‑128 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACg                                                                                                                     >  2:1393684/1‑71 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACg                                                                                                                     <  1:1393684/71‑1 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  <  1:407716/90‑1 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  >  2:407716/1‑90 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTcc                                                >  2:22843/1‑139 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGATTTTcc                                                >  1:124429/1‑139 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATgggggggg                                                                                                                              >  1:491916/1‑60 (MQ=255)
                                                                              tGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATgggggggg                                                                                                                              <  2:491916/61‑2 (MQ=255)
                                                                                  tAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTc                                            <  1:97769/139‑1 (MQ=255)
                                                                                   aaTGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCa                                           <  1:706225/139‑1 (MQ=255)
                                                                                    aTGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCtt                                                    <  2:1353302/129‑1 (MQ=255)
                                                                                    aTGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCtt                                                    >  1:1353302/1‑129 (MQ=255)
                                                                                          tGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTc                                            <  2:821264/131‑1 (MQ=255)
                                                                                          tGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTc                                            >  1:821264/1‑131 (MQ=255)
                                                                                             gCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAagag                                 <  1:368375/139‑1 (MQ=255)
                                                                                             gCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAagag                                 <  2:1038386/139‑1 (MQ=255)
                                                                                                tAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  >  2:953457/1‑72 (MQ=255)
                                                                                                tAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGt                                                                                                  <  1:953457/72‑1 (MQ=255)
                                                                                                 aaCCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAag                                   <  2:791627/133‑1 (MQ=255)
                                                                                                 aaCCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAag                                   >  1:791627/1‑133 (MQ=255)
                                                                                                           gTGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTa                   >  2:1282272/1‑139 (MQ=255)
                                                                                                            tGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                <  2:915299/93‑1 (MQ=255)
                                                                                                            tGATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                >  1:915299/1‑93 (MQ=255)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAgg                                                                                                            >  1:775278/1‑49 (MQ=39)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAgg                                                                                                            <  2:775278/49‑1 (MQ=39)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                >  1:501947/1‑92 (MQ=255)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTtgtg                                                                <  2:501947/92‑1 (MQ=255)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCttt                                                   <  1:1073414/105‑1 (MQ=255)
                                                                                                             gATGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACAATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCttt                                                   >  2:1073414/1‑105 (MQ=255)
                                                                                                              aTGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               >  1:1036650/1‑61 (MQ=255)
                                                                                                              aTGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               <  2:1036650/61‑1 (MQ=255)
                                                                                                              aTGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTAccc                >  2:1482161/1‑139 (MQ=255)
                                                                                                              aTGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTAccc                >  1:115592/1‑139 (MQ=255)
                                                                                                              aTGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTAccc                >  2:1332179/1‑139 (MQ=255)
                                                                                                               tGGCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCa               >  1:230036/1‑139 (MQ=255)
                                                                                                                ggCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCAc              >  2:1020139/1‑139 (MQ=255)
                                                                                                                 gCGACAGCAGAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACt             <  2:230036/139‑1 (MQ=255)
                                                                                                                      agcagAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               >  1:138180/1‑53 (MQ=255)
                                                                                                                      agcagAAAGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAg                                                                                               <  2:138180/53‑1 (MQ=255)
                                                                                                                            aaGTGATGGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCAt  <  1:1332179/139‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                    
ATTGCCCGGCGTTCTGTGGGGCGGGGTGGGTGGTATGCTGGAACTATAGGTAATGCCTAATTGATTGTCAATAGGCTATGCCTAATGTTTTGAGCGTAACCTAATAGGTGATGGCGACAGCAGAAAGTGATGGGGGGGTTAAATAACGGAATCCAGGAGTTTTCCGTCAGACCATATAAGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCAT  >  NC_000913/1419584‑1419845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: