New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2063490	67 (1.070)	3 (0.050)	3/212	6.0	4.2%	coding (978/1080 nt)	cobT	nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase
	?	NC_000913	2063494 =	70 (1.130)					coding (974/1080 nt)	cobT	nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAAGTATAGCTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATGAGATA  >  NC_000913/2063357‑2063615                                                                                                                                      |                                                                                                                              ttAAGTATAGCTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGc                                                                                                                          >  2:390190/1‑139 (MQ=255)  tAAGTATAGCTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGcc                                                                                                                         <  1:845272/139‑1 (MQ=255)      tataGCTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTATATATCGCACAGGCAGCTTCGATGATGGGCATCGCCagag                                                                                                                     <  1:368013/139‑1 (MQ=255)           cTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGc                                                                                                                               <  1:53650/124‑1 (MQ=255)           cTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGc                                                                                                                               >  2:53650/1‑124 (MQ=255)                   aGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTccc                                                                                                        <  2:90738/139‑1 (MQ=255)                    gACTTTTCGTTCTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTcccc                                                                                                       <  1:984937/139‑1 (MQ=255)                     aCTTTTCGTTTTTAACTGTTCAAATCAGAAGTTGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCt                                                                                                      >  2:897006/1‑139 (MQ=255)                     aCTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCt                                                                                                      >  2:114779/1‑139 (MQ=255)                           cGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTa                                                                                                <  2:1497406/139‑1 (MQ=255)                               tttAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACg                                                                                            <  2:843421/139‑1 (MQ=255)                               tttAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACg                                                                                            >  1:1377372/1‑139 (MQ=255)                                 tAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCa                                                                                          <  1:467174/139‑1 (MQ=255)                                 tAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCa                                                                                          <  2:541396/139‑1 (MQ=255)                                 tAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCa                                                                                          <  2:1059673/139‑1 (MQ=255)                                       ttCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCa                                                                                    >  2:87576/1‑139 (MQ=255)                                        tCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTccc                                                                                                        >  1:860869/1‑118 (MQ=255)                                        tCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTccc                                                                                                        <  2:860869/118‑1 (MQ=255)                                          aaaTCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGAAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCatat                                                                                 <  1:897006/139‑1 (MQ=255)                                            aTCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTg                                                                               <  1:87576/139‑1 (MQ=255)                                                 aaGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATa                                                                          >  1:1390050/1‑139 (MQ=255)                                                 aaGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATa                                                                          >  2:801968/1‑139 (MQ=255)                                                      gTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCt                                                                     <  1:390190/139‑1 (MQ=255)                                                      gTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCt                                                                     >  1:102447/1‑139 (MQ=255)                                                            cccGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGG‑‑‑CGCCAGAGCTGCGCCACTCCCCTCACCTAAACg                                                                                            <  2:1278899/107‑1 (MQ=255)                                                            cccGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGG‑‑‑CGCCAGAGCTGCGCCACTCCCCTCACCTAAACg                                                                                            >  1:1278899/1‑107 (MQ=255)                                                              cGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGC‑‑CGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCaa                                                           >  2:1381762/1‑139 (MQ=255)                                                                 tAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCaaa                                                          >  2:1102499/1‑139 (MQ=255)                                                                       aaTATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCgag                                                    <  1:1341085/139‑1 (MQ=255)                                                                          atTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAgc                                                 <  1:801968/139‑1 (MQ=255)                                                                              cTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGagag                                                  >  2:175777/1‑134 (MQ=255)                                                                              cTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGagag                                                  <  1:175777/134‑1 (MQ=255)                                                                                ggCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGc                                                                                                                          >  1:1479152/1‑60 (MQ=255)                                                                                ggCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGc                                                                                                                          <  2:1479152/60‑1 (MQ=255)                                                                                 gcagcaAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCata                                                                                  >  1:551821/1‑99 (MQ=255)                                                                                 gcagcaAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCata                                                                                  <  2:551821/99‑1 (MQ=255)                                                                                 gcagcaAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATAc                                          >  2:213196/1‑139 (MQ=255)                                                                                 gcagcaAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATAc                                          >  2:326809/1‑139 (MQ=255)                                                                                 gcagcaAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATAc                                          >  2:383189/1‑139 (MQ=255)                                                                                        gTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTgcg                                                                                                                <  1:43416/62‑1 (MQ=255)                                                                                        gTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTgcg                                                                                                                >  2:43416/1‑62 (MQ=255)                                                                                                  gttgttgtATATCGCACAGGCAGCTTCGATGATGGGc                                                                                                                               >  1:815735/1‑37 (MQ=255)                                                                                                  gttgttgtATATCGCACAGGCAGCTTCGATGATGGGc                                                                                                                               <  2:815735/37‑1 (MQ=255)                                                                                                    tgttgtATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGa                       <  1:353063/139‑1 (MQ=255)                                                                                                        gtATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAgg                   >  1:1034260/1‑139 (MQ=255)                                                                                                        gtATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAgg                   >  1:202724/1‑139 (MQ=255)                                                                                                           tatCGCACAGGCAGCTTCGCTGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTga                >  1:78357/1‑139 (MQ=255)                                                                                                           tatCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTga                                                                              >  1:32717/1‑77 (MQ=255)                                                                                                           tatCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTga                                                                              <  2:32717/77‑1 (MQ=255)                                                                                                            atCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTgag               >  1:225539/1‑139 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTg                                                                               >  2:1129397/1‑73 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTg                                                                               <  1:1129397/73‑1 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCt                            >  2:70455/1‑124 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCt                            <  1:70455/124‑1 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGaa             >  1:599868/1‑139 (MQ=255)                                                                                                              cGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGaa             >  1:1455471/1‑139 (MQ=255)                                                                                                                cacaGGCAGCTTCGATGGTGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCAtctc                                                                                      >  2:864406/1‑64 (MQ=255)                                                                                                                cacaGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCAtctc                                                                                      <  1:864406/64‑1 (MQ=255)                                                                                                                cacaGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTcc                                                                   <  2:951999/83‑1 (MQ=255)                                                                                                                cacaGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTcc                                                                   >  1:951999/1‑83 (MQ=255)                                                                                                                 acaGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGTCTTTTTCTGCCGACAGGTGAGAAGGa          <  2:1377372/139‑1 (MQ=255)                                                                                                                 acaGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGa          <  1:114779/139‑1 (MQ=255)                                                                                                                   aGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTcc                                                                   <  2:1146217/80‑1 (MQ=255)                                                                                                                   aGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTcc                                                                   >  1:1146217/1‑80 (MQ=255)                                                                                                                   aGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAAt        <  2:78357/139‑1 (MQ=255)                                                                                                                    ggCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAg            >  2:348560/1‑134 (MQ=255)                                                                                                                    ggCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAg            <  1:348560/134‑1 (MQ=255)                                                                                                                       aGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATgaga    <  2:202724/139‑1 (MQ=255)                                                                                                                       aGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATgaga    <  1:1102499/139‑1 (MQ=255)                                                                                                                         cTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCAtct                                                                                       >  2:1265014/1‑54 (MQ=255)                                                                                                                         cTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCAtct                                                                                       <  1:1265014/54‑1 (MQ=255)                                                                                                                         cTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATGAGATa  >  1:298043/1‑139 (MQ=255)                                                                                                                                      cATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATgaga    >  2:1325843/1‑124 (MQ=255)                                                                                                                                      cATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATgaga    <  1:1325843/124‑1 (MQ=255)                                                                                                                                      |                                                                                                                              TTAAGTATAGCTTTTATCAGACTTTTCGTTTTTAACTGTTCAAATCAGAAGTCGTATTCCCCGGTAGAACAATATTACTGGCAGCAAGTTCGCCCATGTTGTTGTATATCGCACAGGCAGCTTCGATGATGGGCATCGCCAGAGCTGCGCCACTCCCCTCACCTAAACGCATCTCCATATTGAGATAAGGCTCCAGCCCCAAATGCGAGAGCGCTATACGCGCGCCTTTTTCTGCCGACAGGTGAGAAGGAATGAGATA  >  NC_000913/2063357‑2063615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.