Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,968,408 | C→T | V32M (GTG→ATG) | cheB ← | fused chemotaxis regulator: protein‑glutamate methylesterase in two‑component regulatory system with CheA |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,968,408 | 0 | C | T | 100.0% | 75.8 / NA | 23 | V32M (GTG→ATG) | cheB | fused chemotaxis regulator: protein‑glutamate methylesterase in two‑component regulatory system with CheA |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/14); total (9/14) |
GCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCCTTACTTAGCGCATACA > NC_000913/1968279‑1968526 | gCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCAt > 2:420464/1‑139 (MQ=255) ttCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTtg > 1:13853/1‑139 (MQ=255) cGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTtgat < 1:130279/139‑1 (MQ=255) cGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTtgat < 1:284781/139‑1 (MQ=255) aaaTCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGAttt < 2:43828/139‑1 (MQ=255) aaTCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTc < 2:89941/139‑1 (MQ=255) tCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAatcat < 1:268180/139‑1 (MQ=255) cAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCg < 2:13853/139‑1 (MQ=255) aGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGa > 2:384515/1‑139 (MQ=255) tCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATc > 1:116076/1‑110 (MQ=255) tCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATc < 2:116076/110‑1 (MQ=255) aaTTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGAttt > 1:584171/1‑82 (MQ=255) aaTTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGAttt < 2:584171/82‑1 (MQ=255) aaTCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGtt < 2:561659/139‑1 (MQ=255) aGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATcc < 2:495015/139‑1 (MQ=255) tCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGtt < 2:74019/132‑1 (MQ=255) tCACGCGCGACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGtt > 1:74019/1‑132 (MQ=255) gcgcgACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCcttactt < 1:420464/139‑1 (MQ=255) cgcgACCAGCGGATCAGGCGCGGTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCcttactta > 1:564887/1‑139 (MQ=255) gTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGa > 2:320116/1‑49 (MQ=255) gTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGa < 1:320116/49‑1 (MQ=255) gTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCCTTACTTAGCGCATaca < 1:214787/126‑1 (MQ=255) gTCGCCATCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCCTTACTTAGCGCATaca > 2:214787/1‑126 (MQ=255) | GCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATCGACAGATAACACCCTGATTTTGCTCATCGTTAATCCTTACTTAGCGCATACA > NC_000913/1968279‑1968526 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |