| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,913,461 | T→C | E64G (GAG→GGG) | relA ← | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,913,461 | 0 | T | C | 100.0% | 133.0 / NA | 35 | E64G (GAG→GGG) | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (19/16); total (19/16) | |||||||||||
CGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGAT > NC_000913/2913327‑2913591 | cGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCccac < 2:187519/139‑1 (MQ=255)cGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCccac < 2:385591/139‑1 (MQ=255) aGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCaa > 1:218698/1‑139 (MQ=255) cgacTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGc < 2:609923/136‑1 (MQ=255) cgacTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGc > 1:609923/1‑136 (MQ=255) ctctCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTgg > 1:350904/1‑139 (MQ=255) tcACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCCCGCCACAATAACAGACTGGCAt < 1:115792/139‑1 (MQ=255) caTCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATACCAGACTGGCATCCGGATGccc > 2:360377/1‑139 (MQ=255) caTCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGAc < 1:278133/123‑1 (MQ=255) caTCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGAc > 2:278133/1‑123 (MQ=255) cGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGt < 2:569970/139‑1 (MQ=255) cGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGt < 1:360377/139‑1 (MQ=255) cTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCt > 2:370679/1‑139 (MQ=255) aCGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCa < 2:257686/139‑1 (MQ=255) tGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATGCccac < 2:576276/76‑1 (MQ=255) cATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATa > 2:499205/1‑139 (MQ=255) cGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGcc < 1:370679/139‑1 (MQ=255) cagcGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAg < 2:218698/139‑1 (MQ=255) cgccgcCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGt < 1:115155/102‑1 (MQ=255) cgccgcCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGt > 2:115155/1‑102 (MQ=255) cgccgcCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGtt > 2:60581/1‑107 (MQ=255) cgccgcCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGtt < 1:60581/107‑1 (MQ=255) cgccgcCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCAc > 2:87909/1‑139 (MQ=255) ccgcccgcAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTc > 2:252842/1‑139 (MQ=255) cccgcAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTcaca > 2:26728/1‑139 (MQ=255) aTGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGttt < 1:60065/96‑1 (MQ=255) aTGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGttt > 2:60065/1‑96 (MQ=255) aTGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACt < 2:454316/108‑1 (MQ=255) aTGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACt > 1:454316/1‑108 (MQ=255) tGTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACtt > 2:103467/1‑139 (MQ=255) gTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTg < 2:350904/139‑1 (MQ=255) gTCGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAACACTCACACGACTTCTGGCTGGTAATACCCAGACTTg > 2:606551/1‑139 (MQ=255) cGAGAGGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCg > 1:91349/1‑139 (MQ=255) agagGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGAt > 1:91624/1‑139 (MQ=255) agagGATCCCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGAt > 1:302792/1‑139 (MQ=255) | CGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGAT > NC_000913/2913327‑2913591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |