| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,037,464 | A→G | D239G (GAC→GGC) | hyaF → | hydrogenase‑1 protein nickel incorporation factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,037,464 | 0 | A | G | 100.0% | 98.4 / NA | 29 | D239G (GAC→GGC) | hyaF | hydrogenase‑1 protein nickel incorporation factor |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (17/12); total (17/12) | |||||||||||
AGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGTGGCTGGCGGAAGCTGCA > NC_000913/1037338‑1037597 | aGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAgg > 2:456962/1‑139 (MQ=255) gCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGcc < 2:452163/139‑1 (MQ=255) aTCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGtt > 1:313712/1‑139 (MQ=255) tgggggCCGGGAAATATTCAGATTCGTACCTTTGGCTAGGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGACCGTTACTGGAAAGTTATGAAATCTGcc < 1:220008/136‑1 (MQ=255) gtgGGCCGGGAACTATTTAGTTTCGTACCATTGGCTATGGCGAGAGCTATATCAACCCCACGGGGTTACTCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGccc < 1:456962/139‑1 (MQ=255) gCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATa > 2:76087/1‑139 (MQ=255) ccGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATAc < 2:205479/139‑1 (MQ=255) ggAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGcc < 2:448165/130‑1 (MQ=255) ggAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGcc > 1:448165/1‑130 (MQ=255) ggAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCgg > 2:306512/1‑139 (MQ=255) tATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAACGTTATGAAATCTGCCCACTACCGGAAGTGGTGCTGGCAGCGCCAGAAGAtt > 1:344775/1‑139 (MQ=255) ggCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTgg > 2:520419/1‑139 (MQ=255) ggCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTgg > 1:268192/1‑139 (MQ=255) agagCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGa > 1:129591/1‑79 (MQ=255) agagCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGa < 2:129591/79‑1 (MQ=255) agagCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGccc < 1:227868/97‑1 (MQ=255) agagCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGccc > 2:227868/1‑97 (MQ=255) tatCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGaa < 1:3435/100‑1 (MQ=255) tatCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGaa > 2:3435/1‑100 (MQ=255) aCGCCACGGGGTTACCCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAAGACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCg > 1:408013/1‑139 (MQ=255) cGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAg < 1:379769/139‑1 (MQ=255) cGCCATGTCTGGCATTTACGCTGTACGGGTACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTAt > 1:267243/1‑139 (MQ=255) cGCCATGTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTAt > 2:495332/1‑139 (MQ=255) gTCTGGCATTTACGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGt > 2:553815/1‑139 (MQ=255) aCGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGc > 2:357967/1‑115 (MQ=255) aCGCTGTACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGc < 1:357967/115‑1 (MQ=255) tACGGGTACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGTGGCTGGCGGAAGCTGCa < 2:267243/139‑1 (MQ=255) tACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGtggctggc > 2:291297/1‑129 (MQ=255) tACGGGCACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGtggctggc < 1:291297/129‑1 (MQ=255) | AGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGTGGCTGGCGGAAGCTGCA > NC_000913/1037338‑1037597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |