| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2099879 | 387 (7.030) | 3 (0.060) | 3/216 | 5.1 | 0.80% | coding (1390/1407 nt) | gnd | 6‑phosphogluconate dehydrogenase, decarboxylating |
| ? | NC_000913 | = 2099884 | 365 (6.750) | coding (1385/1407 nt) | gnd | 6‑phosphogluconate dehydrogenase, decarboxylating | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCCTCAATTTTATTGTTGGTTAAATCAGATTAATCCAGCCATTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2099832‑2099879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGC < NC_000913/2099884‑2099747 GGCCTCAATTTTATTGTTGGTTAAATCAGATTAATCCAGCCATTCGGTTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCC > 1:503406/1‑132GGCCTCAATTTTATTGTTGGTTAAATCAGATTAATCCAGCCATTCGGTTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCC < 2:503406/132‑1 GCCTCAATTTTATTGTTGGTTAAATCAGATTAATCCAGCCATTCGGTTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGATGCCCGGCGTATATTGCATCGGGCTTTTTTTTTCCAAATATCT > 2:204023/1‑139 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGC > 1:518710/1‑139 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA > 1:1162596/1‑109 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA < 1:174592/109‑1 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA > 1:179695/1‑109 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA < 2:1162596/109‑1 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA > 2:174592/1‑109 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA < 2:179695/109‑1 TTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGA > 1:707409/1‑99 TTCCATACCGAATGGCTGGATTAATCTAATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGA < 2:707409/99‑1 GGCCTCAATTTTATTGTTGGTTAAATCAGATTAATCCAGCCATTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2099832‑2099879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtTCCATACCGAATGGCTGGATTAATCTGATTTAACCAACAATAAAATTGAGGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGC < NC_000913/2099884‑2099747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |