| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,104,949 | C→T | intergenic (+47/‑12) | csgA → / → csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,949 | 0 | C | T | 98.8% | 284.5 / ‑3.8 | 83 | intergenic (+47/‑12) | csgA/csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (38/44); minor base . (0/1); total (38/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
TGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAG > NC_000913/1104815‑1105079 | tgctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGga > 2:303797/1‑139 (MQ=255) gctgtAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGgag < 1:351179/139‑1 (MQ=255) gctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGgag < 2:1162306/139‑1 (MQ=255) gctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGgag < 1:303797/139‑1 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGgaga < 1:266643/139‑1 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTT‑GGGagaa < 2:607419/139‑1 (MQ=255) cAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGagaaga < 2:971469/139‑1 (MQ=255) tGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAatat > 2:1150478/1‑139 (MQ=255) aGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATa < 1:473292/139‑1 (MQ=255) aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTc > 2:1080676/1‑139 (MQ=255) ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGc > 1:880874/1‑139 (MQ=255) cGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:832010/139‑1 (MQ=255) tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc > 1:55777/1‑139 (MQ=255) cGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc > 2:1025167/1‑139 (MQ=255) cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc < 2:55777/139‑1 (MQ=255) gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa < 1:1025167/139‑1 (MQ=255) gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa > 2:302930/1‑139 (MQ=255) gACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc > 2:508799/1‑134 (MQ=255) gACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc < 1:508799/134‑1 (MQ=255) tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGa < 2:1162707/139‑1 (MQ=255) tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGa < 1:1080676/139‑1 (MQ=255) catcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt < 1:302930/139‑1 (MQ=255) catcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt < 2:880874/139‑1 (MQ=255) gTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta < 2:390600/139‑1 (MQ=255) cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGagaaga < 1:204065/60‑1 (MQ=255) cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGagaaga > 2:204065/1‑60 (MQ=255) aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGagaa < 2:584846/55‑1 (MQ=255) aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGagaa > 1:584846/1‑55 (MQ=255) tACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAGGGGGATGTGTATACCatt < 1:530485/139‑1 (MQ=255) aCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGaa < 1:566046/62‑1 (MQ=255) aCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGaa > 2:566046/1‑62 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa > 2:601025/1‑90 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa < 1:601025/90‑1 (MQ=255) tcatTTGTATTACAGCAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGAt > 2:827557/1‑95 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTTGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg < 2:887280/120‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTGTTACTCCTTGCGGCACTTTCCAGTCAGAt < 1:827557/95‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACt < 1:777786/71‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACt > 2:777786/1‑71 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGAt > 2:731858/1‑95 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGAt < 1:731858/95‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAcc < 2:1219605/99‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAcc > 1:1219605/1‑99 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCtt < 1:812809/101‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCtt > 2:812809/1‑101 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc < 2:1036674/111‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc > 1:1036674/1‑111 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg > 1:887280/1‑120 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc > 2:1051565/1‑139 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc > 1:14661/1‑139 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc > 1:547781/1‑139 (MQ=255) catTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGa < 2:508332/108‑1 (MQ=255) catTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGa > 1:508332/1‑108 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt < 1:449050/120‑1 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt > 2:449050/1‑120 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTg > 2:1021794/1‑139 (MQ=255) tGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTcc > 1:1043842/1‑135 (MQ=255) tGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTcc < 2:1043842/135‑1 (MQ=255) gTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGGGAAGAATATGAATACGTTATTACCCCTTGCGGCACTTTCCAGTCAGGTAACCTTTAATAAGACCCAGCAGGGGGGTGTGTATACCATTATTCCTGaaa > 2:530485/1‑138 (MQ=255) gTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc < 1:882628/105‑1 (MQ=255) gTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc > 2:882628/1‑105 (MQ=255) gTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCat < 1:1241380/128‑1 (MQ=255) gTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCat > 2:1241380/1‑128 (MQ=255) tATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGt < 2:14661/139‑1 (MQ=255) tATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGt < 2:775542/139‑1 (MQ=255) tATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGt < 2:547781/139‑1 (MQ=255) tATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGt < 1:1051565/139‑1 (MQ=255) ttACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGaa < 2:841304/50‑1 (MQ=255) ttACAGAAACAGGGCGCAAGACCTGTTTTTTTTTGGGAGAAGAATATGaa > 1:841304/1‑50 (MQ=255) aGAAACAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActct > 2:1231245/1‑139 (MQ=255) aaaCAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTa > 2:463932/1‑139 (MQ=255) aCAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt < 1:1067411/124‑1 (MQ=255) aCAGGGCGCAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt > 2:1067411/1‑124 (MQ=255) gcgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggg < 1:1110545/99‑1 (MQ=255) gcgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggg > 2:1110545/1‑99 (MQ=255) gcgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc > 1:181843/1‑139 (MQ=255) gcgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc > 1:74409/1‑139 (MQ=255) gcgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc > 2:865239/1‑139 (MQ=255) cgcAAGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCt < 2:74409/139‑1 (MQ=255) aGCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc > 1:37383/1‑139 (MQ=255) gCCCTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCt < 1:921038/139‑1 (MQ=255) cTGTTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtgtg < 1:1021794/139‑1 (MQ=255) ttttttttTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCag < 2:37383/139‑1 (MQ=255) ttttttttTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCag < 1:1231245/139‑1 (MQ=255) ttttGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAct < 1:537656/111‑1 (MQ=255) | TGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAG > NC_000913/1104815‑1105079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |