| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,876,388 | C→T | intergenic (‑59/‑193) | cysD ← / → iap | sulfate adenylyltransferase, subunit 2/aminopeptidase in alkaline phosphatase isozyme conversion |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,876,388 | 0 | C | T | 100.0% | 105.1 / NA | 32 | intergenic (‑59/‑193) | cysD/iap | sulfate adenylyltransferase, subunit 2/aminopeptidase in alkaline phosphatase isozyme conversion |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (16/16); total (16/16) | |||||||||||
TCTGCCGCCACCTCGCGAATAATGTGGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGCGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAAT > NC_000913/2876253‑2876512 | tCTGCCGCCACCTCGCGAATAATGTGGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTa > 2:1027174/1‑139 (MQ=255) tGCCGCCACCTCGCGAATAATGTGGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAag > 1:581423/1‑139 (MQ=255) ccTCGCGAATAATGTGGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGaa < 2:581423/139‑1 (MQ=255) tgtgGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCaa < 1:1027174/139‑1 (MQ=255) gtgGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAAt < 2:243175/139‑1 (MQ=255) aTGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGa < 2:1239081/139‑1 (MQ=255) cTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATg > 2:1165102/1‑139 (MQ=255) tCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGagt > 2:707285/1‑139 (MQ=255) tCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGagt < 1:446944/139‑1 (MQ=255) gCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGagtagt > 2:843165/1‑139 (MQ=255) ccAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCt > 1:1223074/1‑139 (MQ=255) gTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTaa < 1:578023/139‑1 (MQ=255) gTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTATAATGAGTAGTTCCTTAACGGAATAACGATTTGGCa > 1:746913/1‑139 (MQ=255) cGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCaaa > 1:528848/1‑139 (MQ=255) ttCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCt > 1:910188/1‑139 (MQ=255) ttGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAgg > 2:1177778/1‑139 (MQ=255) tGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCa > 2:1126011/1‑112 (MQ=255) tGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCa < 1:1126011/112‑1 (MQ=255) tACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTaa < 2:500651/131‑1 (MQ=255) tACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATAGCAAAAAGTGCTTaa > 1:500651/1‑131 (MQ=255) ttttCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCggg < 1:707285/139‑1 (MQ=255) ttttCTTGCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCggg < 2:528848/139‑1 (MQ=255) gCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGag < 1:360176/63‑1 (MQ=255) gCCATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGag > 2:360176/1‑63 (MQ=255) cATCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGa < 1:1165102/139‑1 (MQ=255) aTCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGag < 1:354868/60‑1 (MQ=255) aTCAGATGTTTCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGag > 2:354868/1‑60 (MQ=255) tCGACTATAGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAAt < 1:843165/139‑1 (MQ=255) ataGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCg < 1:641218/111‑1 (MQ=255) ataGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCg > 2:641218/1‑111 (MQ=255) aGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGagtag > 2:1021690/1‑45 (MQ=255) aGGGAGTGTAAGAGAACGAATGAAATTACCAATTAGAATGagtag < 1:1021690/45‑1 (MQ=255) | TCTGCCGCCACCTCGCGAATAATGTGGATGCTTTCCGCCTCCAGTTGCCGCAGGTGAGTAAGTCGTATTTGATCCATAACCGTTCCTTTGCAATACCGCTATTTTCTTGCCATCAGATGTTTCGACTATAGGGAGCGTAAGAGAACGAATGAAATTACCAATTAGAATGAGTAGTTCCTTAACGGAATAACGATTTGGCAAAGCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAAT > NC_000913/2876253‑2876512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |