Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,635,299 G→A A4A (GCC→GCT rob ← right oriC‑binding transcriptional activator, AraC family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,635,2990GA100.0% 297.1 / NA 84A4A (GCC→GCTrobright oriC‑binding transcriptional activator, AraC family
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (41/43);  total (41/43)

TGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGAC  >  NC_000913/4635168‑4635428
                                                                                                                                   |                                                                                                                                 
tGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCt                                                                                                                               <  2:837055/136‑1 (MQ=255)
tGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGAGTAAAAGGTCGCGAATAATGCCAGCCt                                                                                                                               >  1:837055/1‑136 (MQ=255)
 ggCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATc                                                                                                                           >  1:855356/1‑139 (MQ=255)
  gCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          >  1:1305/1‑139 (MQ=255)
  gCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          <  1:107318/139‑1 (MQ=255)
  gCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          <  1:588846/139‑1 (MQ=255)
  gCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          >  2:107318/1‑139 (MQ=255)
       tGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          >  1:1052240/1‑134 (MQ=255)
       tGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          <  2:1052240/134‑1 (MQ=255)
        gACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATaaaa                                                                                                                    <  1:347524/139‑1 (MQ=255)
               ttAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTc                                                                                                             <  1:1040797/139‑1 (MQ=255)
                       tctcTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTc                                                                                                     >  2:1165545/1‑139 (MQ=255)
                                    cACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCAcc                                                                                        <  2:1305/139‑1 (MQ=255)
                                     aCTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            <  2:900793/134‑1 (MQ=255)
                                     aCTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            >  1:900793/1‑134 (MQ=255)
                                                ccTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTa                                                                            >  1:3812/1‑139 (MQ=255)
                                                    cTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCt                                                                                                                               <  1:1114772/84‑1 (MQ=255)
                                                    cTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCt                                                                                                                               >  2:1114772/1‑84 (MQ=255)
                                                    cTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATcc                                                                                                         <  2:95788/106‑1 (MQ=255)
                                                    cTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATcc                                                                                                         >  1:95788/1‑106 (MQ=255)
                                                    cTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTg                                                                        >  2:1110702/1‑139 (MQ=255)
                                                     tttCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTgg                                                                       >  1:329956/1‑139 (MQ=255)
                                                      ttCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCAt                                                                                                           >  2:224011/1‑102 (MQ=255)
                                                      ttCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCAt                                                                                                           <  1:224011/102‑1 (MQ=255)
                                                       tCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGat                                                                     <  2:329956/139‑1 (MQ=255)
                                                         gccgcTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataa                                                                   >  1:1095573/1‑139 (MQ=255)
                                                                    gTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCAtttttt                                                        <  2:1095573/139‑1 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATc                                                                                                                           >  1:628237/1‑71 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATc                                                                                                                           <  2:628237/71‑1 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            >  2:1015819/1‑102 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            <  1:1015819/102‑1 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataat                                                                  >  2:1202282/1‑128 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataat                                                                  <  1:1202282/128‑1 (MQ=255)
                                                                     tCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTg                                                       <  1:1097617/139‑1 (MQ=255)
                                                                        aGCGACAGGGACTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGTATAATAGCATTTTTTGCTg                                                    <  1:826425/139‑1 (MQ=255)
                                                                          cGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGtt                                                  >  1:1102040/1‑139 (MQ=255)
                                                                               ggggCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACg                                                                                              >  1:826802/1‑90 (MQ=255)
                                                                               ggggCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACg                                                                                              <  2:826802/90‑1 (MQ=255)
                                                                               ggggCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCt                                                                                       >  1:370129/1‑97 (MQ=255)
                                                                               ggggCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCt                                                                                       <  2:370129/97‑1 (MQ=255)
                                                                                   cTGATCCAGATGACCTTCCAGCCAGATTAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCa                                        >  2:839698/1‑139 (MQ=255)
                                                                                    tGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCa                                        <  1:1165545/139‑1 (MQ=255)
                                                                                       tCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAgtg                                     >  1:651210/1‑139 (MQ=255)
                                                                                       tCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAgtg                                     >  1:356648/1‑139 (MQ=255)
                                                                                       tCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAgtg                                     >  1:190683/1‑139 (MQ=255)
                                                                                         cAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGtt                                   <  2:3812/139‑1 (MQ=255)
                                                                                          aGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTg                                                       <  1:125387/118‑1 (MQ=255)
                                                                                          aGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTg                                                       >  2:125387/1‑118 (MQ=255)
                                                                                             tGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttttt                               <  1:1110702/139‑1 (MQ=255)
                                                                                                ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            >  2:1107737/1‑75 (MQ=255)
                                                                                                ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            <  1:1107737/75‑1 (MQ=255)
                                                                                                ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGc                                                      <  1:630909/113‑1 (MQ=255)
                                                                                                ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGc                                                      >  2:630909/1‑113 (MQ=255)
                                                                                                ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCt                            >  2:717260/1‑139 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTg                                                                                                                              <  2:782192/40‑1 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTg                                                                                                                              >  1:782192/1‑40 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          >  2:288291/1‑44 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          <  2:975885/44‑1 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          <  1:288291/44‑1 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATcc                                                                                                                          >  1:975885/1‑44 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCAcc                                                                                        >  2:1119999/1‑78 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCAcc                                                                                        <  1:1119999/78‑1 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCtt                           >  1:632894/1‑139 (MQ=255)
                                                                                                 cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCtt                           >  1:1071250/1‑139 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATc                                                                                                                           <  2:1075670/42‑1 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATc                                                                                                                           >  1:1075670/1‑42 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTc                                                                                                             <  2:415051/56‑1 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTc                                                                                                             >  1:415051/1‑56 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            <  2:1137856/73‑1 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAg                                                                                            >  1:1137856/1‑73 (MQ=255)
                                                                                                  ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTta                          <  2:1071250/139‑1 (MQ=255)
                                                                                                   tCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACg                                                                                              >  2:49889/1‑70 (MQ=255)
                                                                                                   tCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACg                                                                                              <  1:49889/70‑1 (MQ=255)
                                                                                                   tCCAGCCAGATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtag                         >  2:1068172/1‑139 (MQ=255)
                                                                                                     cagccagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagta                       <  2:855356/139‑1 (MQ=255)
                                                                                                     cagccagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagta                       <  1:1175941/139‑1 (MQ=255)
                                                                                                     cagccagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagta                       <  2:374509/139‑1 (MQ=255)
                                                                                                      agccagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagtag                      >  2:1000163/1‑139 (MQ=255)
                                                                                                         cagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGt                   <  1:651759/139‑1 (MQ=255)
                                                                                                         cagATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGt                   <  2:1102040/139‑1 (MQ=255)
                                                                                                          agATTAAAAGGTCGCGAATAATGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTa                  <  1:1021098/139‑1 (MQ=255)
                                                                                                                      cgcgAATAATGCCAGCCTGATCCATAAAATATCCTc                                                                                                             <  1:450760/36‑1 (MQ=255)
                                                                                                                      cgcgAATAATGCCAGCCTGATCCATAAAATATCCTc                                                                                                             >  2:450760/1‑36 (MQ=255)
                                                                                                                          aataatGCCAGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGAc  <  2:190683/139‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                 
TGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGAC  >  NC_000913/4635168‑4635428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: