| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 164,205 | A→G | S701G (AGT→GGT) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,205 | 0 | A | G | 98.8% | 319.5 / ‑3.4 | 85 | S701G (AGT→GGT) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (47/37); minor base T (0/1); total (47/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
TTTATTGGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGCCC > NC_000913/164072‑164337 | tttATTGGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGaa > 1:183156/1‑139 (MQ=255) ggCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAGATTACTCGACATTTATCAGGCACTCCGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 2:1011214/139‑1 (MQ=255) cAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTgc > 1:297940/1‑139 (MQ=255) aGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 2:936912/136‑1 (MQ=255) aGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt > 1:936912/1‑136 (MQ=255) gcgcTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTgcgc > 1:1022971/1‑139 (MQ=255) gcgcTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTgcgc > 1:1282574/1‑139 (MQ=255) cgcTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATCTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGGAACGTCTGGATGGTGAATTGCCTGCGCa < 2:1022971/139‑1 (MQ=255) gAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATTGTGAATTGCCTGCGCATTaca < 2:464094/139‑1 (MQ=255) tGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGc < 1:585894/139‑1 (MQ=255) ggCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt > 2:463756/1‑122 (MQ=255) ggCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 1:463756/122‑1 (MQ=255) tGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGAt < 1:982811/139‑1 (MQ=255) gACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATc > 1:627142/1‑139 (MQ=255) cTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt > 2:431094/1‑104 (MQ=255) cTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 1:431094/104‑1 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACt > 1:538474/1‑113 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACt < 2:538474/113‑1 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCa > 1:649050/1‑138 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCa < 2:649050/138‑1 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCAt > 1:53982/1‑139 (MQ=255) cGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCAtt > 2:1253608/1‑139 (MQ=255) cGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCAtt > 1:1324525/1‑139 (MQ=255) tACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCg < 1:650581/139‑1 (MQ=255) cATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAGTGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt < 1:929648/139‑1 (MQ=255) cATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt > 1:1248735/1‑139 (MQ=255) cATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt > 1:1177118/1‑139 (MQ=255) cATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt > 1:1481062/1‑139 (MQ=255) aCTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCg < 2:554450/132‑1 (MQ=255) aCTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCg > 1:554450/1‑132 (MQ=255) cTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATg > 2:287311/1‑139 (MQ=255) cTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATg < 1:1253608/139‑1 (MQ=255) cgGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGAt > 1:174309/1‑139 (MQ=255) cTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCgcgc > 2:61668/1‑139 (MQ=255) gACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTgg < 2:743565/139‑1 (MQ=255) tATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTga < 2:174309/139‑1 (MQ=255) tCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGa > 2:767437/1‑80 (MQ=255) tCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGa < 1:767437/80‑1 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGc > 1:183280/1‑128 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGc < 2:183280/128‑1 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGc > 2:695579/1‑139 (MQ=255) cTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGAt > 1:1091790/1‑86 (MQ=255) cTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGAt < 2:1091790/86‑1 (MQ=255) cTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAag < 2:1248735/139‑1 (MQ=255) tACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAaga > 2:757267/1‑139 (MQ=255) tACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAaga > 2:1212810/1‑139 (MQ=255) gATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGtt > 2:1547933/1‑139 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 1:1009099/43‑1 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTgag > 2:1152666/1‑120 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTgag < 1:1152666/120‑1 (MQ=255) aCTTGATAGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt > 2:1009099/1‑43 (MQ=255) ttGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGa < 1:757267/139‑1 (MQ=255) tGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAAcccgcccg > 1:1029314/1‑100 (MQ=255) tGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGcca > 2:1339346/1‑139 (MQ=255) tGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCGGCGCATTACACTGTGGCGACGGGAAGCCGGATCGCCATTCGTGATCATGAAGATAAcccgcccg < 2:1029314/100‑1 (MQ=255) ggggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGccac < 1:469999/139‑1 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATg > 1:1219528/1‑83 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATg < 2:1219528/83‑1 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCg < 2:749346/131‑1 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCg > 1:749346/1‑131 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGccacc < 1:1212810/139‑1 (MQ=255) ggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAAcccgcc < 2:1640943/95‑1 (MQ=255) ggAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAAcccgcc > 1:1640943/1‑95 (MQ=255) gAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCaa > 2:1537363/1‑139 (MQ=255) gAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCaa > 1:759678/1‑139 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCg > 1:473020/1‑70 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCg < 2:473020/70‑1 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCa < 1:386741/76‑1 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCa > 2:386741/1‑76 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGc > 2:1641185/1‑125 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGc < 1:1641185/125‑1 (MQ=255) tGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGTCACCAATcc > 1:414268/1‑139 (MQ=255) caACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt > 1:1232359/1‑67 (MQ=255) caACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt < 2:1232359/67‑1 (MQ=255) caACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCcgacga < 2:53982/139‑1 (MQ=255) caACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCcgacga < 2:1324525/139‑1 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGa > 1:146087/1‑43 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGa < 2:146087/43‑1 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTg > 1:1355654/1‑88 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTg < 2:1355654/88‑1 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGaa < 1:871744/98‑1 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGaa > 2:871744/1‑98 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGcc > 2:1519060/1‑139 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGcc > 2:733178/1‑139 (MQ=255) cTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGccc > 2:182633/1‑139 (MQ=255) | TTTATTGGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGCCC > NC_000913/164072‑164337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |