| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,313,434 | T→C | intergenic (+258/‑54) | micF → / → rcsD | sRNA antisense regulator affecting ompF expression, Hfq‑dependent/phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,313,434 | 0 | T | C | 94.7% | 258.5 / 2.5 | 78 | intergenic (+258/‑54) | micF/rcsD | sRNA antisense regulator affecting ompF expression, Hfq‑dependent/phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (39/33); total (42/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.93e-01 | |||||||||||
TGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATC > NC_000913/2313306‑2313568 | tgGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTtata < 2:196055/139‑1 (MQ=255)tgGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTtata < 1:719523/139‑1 (MQ=255) gCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTg > 1:1351546/1‑139 (MQ=255) aTTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTcgc > 1:905022/1‑139 (MQ=255) cAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTaa < 2:1351546/139‑1 (MQ=255) tGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAAc < 1:1218740/135‑1 (MQ=255) tGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAAc > 2:1218740/1‑135 (MQ=255) tGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGt > 1:1568251/1‑139 (MQ=255) cTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTta > 1:1226315/1‑100 (MQ=255) cTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTta < 2:1226315/100‑1 (MQ=255) cTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATaa > 1:743343/1‑139 (MQ=255) tGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAac > 1:1048966/1‑139 (MQ=255) tACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAacac > 1:161334/1‑139 (MQ=255) cATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGa < 2:743343/139‑1 (MQ=255) aTCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGaa < 1:1249774/139‑1 (MQ=255) tttCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGt < 1:830980/139‑1 (MQ=255) ttCCCCCAATGCAGGATGATAAATATCATGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTc > 2:428289/1‑139 (MQ=255) cAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAag > 1:1476090/1‑139 (MQ=255) tGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAgaga > 1:1366013/1‑139 (MQ=255) tGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAgaga > 2:1544832/1‑139 (MQ=255) gCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGAc < 1:1544832/139‑1 (MQ=255) gCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGAc < 2:85367/139‑1 (MQ=255) aGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACaa < 2:1476090/139‑1 (MQ=255) tAAATATCACGGGAGAATAGAGAATCATCAATCATGTAAGAGTCTGGAAGTTCACACTG‑‑CCTTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGa > 1:1065884/1‑139 (MQ=255) tAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCAc > 2:1214124/1‑139 (MQ=255) tAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCAc > 1:664438/1‑139 (MQ=255) tAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAA‑‑ACGAATGCGTCAGAAAGAGACAACGGCCACGa > 2:1506303/1‑139 (MQ=255) atCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGAccc < 2:1366013/139‑1 (MQ=255) cACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTcgc < 2:676744/80‑1 (MQ=255) cACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTcgc > 1:676744/1‑80 (MQ=255) gagaATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTa < 2:823945/139‑1 (MQ=255) agaATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTAc > 1:866361/1‑139 (MQ=255) agaATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTAc > 1:629956/1‑139 (MQ=255) agaATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTAc > 2:728543/1‑139 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTc < 2:1477086/81‑1 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTc > 1:1477086/1‑81 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATaaa > 2:1263367/1‑86 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATaaa < 1:1263367/86‑1 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCtt < 1:1220478/126‑1 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCtt > 2:1220478/1‑126 (MQ=255) aaTCATCAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCg > 1:673331/1‑139 (MQ=255) atcatcAATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCgg < 2:866361/139‑1 (MQ=255) tcatcaATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCggg < 2:1567587/139‑1 (MQ=255) catcaATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCtt < 1:1063856/123‑1 (MQ=255) catcaATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCgggg > 2:213062/1‑139 (MQ=255) catcaATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCgggg > 2:133884/1‑139 (MQ=255) catcaATCAGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGACACGACCCGCtt > 2:1063856/1‑123 (MQ=255) tcaatcaGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAg > 1:596455/1‑139 (MQ=255) tcaatcaGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAg < 2:1568251/139‑1 (MQ=255) atcaGGTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCAt > 2:1296863/1‑139 (MQ=255) ggTAAGAGTCTGGAATTTCACACTGCACCCTTTATAc < 1:235931/37‑1 (MQ=255) ggTAAGAGTCTGGAATTTCACACTGCACCCTTTATAc > 2:235931/1‑37 (MQ=255) gTAAGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccc > 2:105482/1‑139 (MQ=255) aaGAGTCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAA‑‑ACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGctt < 1:1506303/139‑1 (MQ=255) tCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGcttctt > 2:1470907/1‑139 (MQ=255) tCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCg < 2:12768/133‑1 (MQ=255) tCTGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCg > 1:12768/1‑133 (MQ=255) tGGAATTTCACTCTG‑‑CCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTGCCGGGGAGCATTACCCGCTTCTTTTTa < 2:1065884/139‑1 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACaa < 2:741692/88‑1 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACaa > 1:741692/1‑88 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCtttt > 1:769001/1‑139 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCtttt < 1:428289/139‑1 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCtttt < 2:629956/139‑1 (MQ=255) tGGAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCtttt > 1:813502/1‑139 (MQ=255) ggAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCggg > 1:778809/1‑118 (MQ=255) ggAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCggg < 2:778809/118‑1 (MQ=255) ggAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCttttt > 1:1082538/1‑139 (MQ=255) ggAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCttttt > 2:257192/1‑139 (MQ=255) ggAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCttttt > 2:1477111/1‑139 (MQ=255) gAATTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTa < 1:1214124/139‑1 (MQ=255) aTTTCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACt < 2:664438/139‑1 (MQ=255) tCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGt > 2:559420/1‑68 (MQ=255) tCACACTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGt < 1:559420/68‑1 (MQ=255) cacaCTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTg > 1:22300/1‑139 (MQ=255) cacTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGAt < 1:133884/139‑1 (MQ=255) cacTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGAt < 2:673331/139‑1 (MQ=255) acTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATc < 1:213062/139‑1 (MQ=255) acTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATc < 2:905022/139‑1 (MQ=255) | TGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATC > NC_000913/2313306‑2313568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |