Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	293,780	(A)7→6	coding (139/699 nt)	yagL ←	CP4‑6 prophage, DNA‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	293,774	0	A	.	100.0%	294.5 / NA	70	coding (145/699 nt)	yagL	CP4‑6 prophage, DNA‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (39/31);  total (39/31)

GCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTAAAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTGGTAAAGTAG  >  NC_000913/293639‑293903                                                                                                                                        |                                                                                                                                  gCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaa                                                                                                                                >  1:931883/1‑139 (MQ=255) gCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaa                                                                                                                                >  2:598282/1‑139 (MQ=255)       aaaCAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaaatgaa                                                                                                                          <  1:96960/139‑5 (MQ=255)          caacCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGc                                                                                                                      <  2:604263/139‑1 (MQ=255)            acCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCAt                                                                                                                    >  1:959058/1‑139 (MQ=255)            acCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCAt                                                                                                                    <  1:178096/139‑1 (MQ=255)            acCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCAt                                                                                                                    <  1:598282/139‑1 (MQ=255)             ccTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATc                                                                                                                   >  1:476868/1‑139 (MQ=255)                 tttAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGAt                                                                                                               >  2:772854/1‑139 (MQ=255)                 tttAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGAt                                                                                                               >  1:440751/1‑139 (MQ=255)                  ttAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATg                                                                                                              <  2:959058/139‑1 (MQ=255)                    aaTATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCa                                                                                                            <  2:931883/139‑1 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTc                                                                                                         >  1:836282/1‑135 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTc                                                                                                         <  2:836282/135‑1 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCg                                                                                                       >  2:283699/1‑137 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCg                                                                                                       <  1:283699/137‑1 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGgt                                                                                                     >  2:28604/1‑139 (MQ=255)                           aCCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGgt                                                                                                     >  2:127259/1‑139 (MQ=255)                                cTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCAt                                                                                                >  1:517416/1‑139 (MQ=255)                                    aTCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAat                                                                                            >  1:1013997/1‑139 (MQ=255)                                    aTCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAat                                                                                            >  1:56180/1‑139 (MQ=255)                                              gTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGa                                                                                  <  1:127259/139‑1 (MQ=255)                                               ttCAGGTAGAATATTAAATTTTTGGCATATCTCAGCACGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTAtttttt                                                                                    <  1:705575/136‑1 (MQ=255)                                               ttCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTAtttttt                                                                                    >  2:705575/1‑136 (MQ=255)                                               ttCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGAt                                                                                 >  2:52508/1‑139 (MQ=255)                                               ttCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGAt                                                                                 >  2:964877/1‑139 (MQ=255)                                               ttCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGAt                                                                                 >  1:17081/1‑139 (MQ=255)                                                   ggTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCt                                                                             >  1:419492/1‑139 (MQ=255)                                                   ggTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCt                                                                             >  2:297877/1‑139 (MQ=255)                                                   ggTAGAATATTAAATTTTTGGCATATCGCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATATTTTGATACCt                                                                             >  2:724981/1‑139 (MQ=255)                                                       gAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATg                                                                                                              <  2:1093/102‑1 (MQ=255)                                                       gAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATg                                                                                                              >  1:1093/1‑102 (MQ=255)                                                       gAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGaat                                                                         >  1:200553/1‑139 (MQ=255)                                                         atatTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTCTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGaataa                                                                       >  1:600799/1‑139 (MQ=255)                                                            ttAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaaatgaa                                                                                                                          >  1:946715/1‑82 (MQ=255)                                                            ttAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaaatgaa                                                                                                                          <  2:946715/86‑5 (MQ=255)                                                             tAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTc                                                                   >  1:865405/1‑139 (MQ=255)                                                               aaTTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCAt                                                                 >  2:646028/1‑139 (MQ=255)                                                                aTTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCAtt                                                                <  2:440751/139‑1 (MQ=255)                                                                  ttttGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCAtttt                                                              <  1:28604/139‑1 (MQ=255)                                                                    ttGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGc                                                            >  2:370230/1‑139 (MQ=255)                                                                            tctcAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATaaaaaa                                                    <  1:997373/139‑1 (MQ=255)                                                                              tcAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAaaca                                                  <  1:52508/139‑1 (MQ=255)                                                                                aGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAaacaac                                                <  1:772854/139‑1 (MQ=255)                                                                                aGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAaacaac                                                <  1:297877/139‑1 (MQ=255)                                                                                     gtgagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCaaaa                                           >  1:103257/1‑139 (MQ=255)                                                                                      tgagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaaatgaa                                                                                                                          >  1:104173/1‑56 (MQ=255)                                                                                      tgagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaaatgaa                                                                                                                          <  2:104173/60‑5 (MQ=255)                                                                                      tgagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATAc                                                                               <  1:240591/102‑1 (MQ=255)                                                                                      tgagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATAc                                                                               >  2:240591/1‑102 (MQ=255)                                                                                       gagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAAt                                         >  2:765829/1‑139 (MQ=255)                                                                                       gagtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAAt                                         >  2:495318/1‑139 (MQ=255)                                                                                        agtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATa                                        >  1:1018832/1‑139 (MQ=255)                                                                                        agtgaTGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATa                                        >  1:447292/1‑139 (MQ=255)                                                                                          tgatgaTCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATaga                                      <  1:370230/139‑1 (MQ=255)                                                                                             tgatCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaa                                                                                                                               >  1:861434/1‑48 (MQ=255)                                                                                             tgatCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTaaaaa                                                                                                                               <  2:861434/48‑1 (MQ=255)                                                                                             tgatCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATagagag                                   >  1:600894/1‑139 (MQ=255)                                                                                                  tGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGAtt                              >  2:777831/1‑139 (MQ=255)                                                                                                         cTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCa                                              <  1:796227/116‑1 (MQ=255)                                                                                                         cTTTCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCa                                              >  2:796227/1‑116 (MQ=255)                                                                                                           ttCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGAt                     >  1:48596/1‑139 (MQ=255)                                                                                                           ttCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGAt                     >  1:637623/1‑139 (MQ=255)                                                                                                            tCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATg                                                                                                              >  1:276863/1‑49 (MQ=255)                                                                                                            tCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATg                                                                                                              <  2:276863/49‑1 (MQ=255)                                                                                                            tCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAaaca                                                  >  2:694095/1‑109 (MQ=255)                                                                                                            tCTTGCTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAaaca                                                  <  1:694095/109‑1 (MQ=255)                                                                                                                 cTGTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTa               <  1:777831/139‑1 (MQ=255)                                                                                                                   gTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAGTAGAGAGTGATTGCCAGCGATACTTTAAc             <  1:646028/139‑1 (MQ=255)                                                                                                                   gTTCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAAc             <  2:447292/139‑1 (MQ=255)                                                                                                                    ttCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGc                        >  1:432953/1‑127 (MQ=255)                                                                                                                    ttCGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGc                        <  2:432953/127‑1 (MQ=255)                                                                                                                      cGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTgg          >  1:540621/1‑139 (MQ=255)                                                                                                                      cGCTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTgg          <  2:48596/139‑1 (MQ=255)                                                                                                                        cTACTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATTAAAAACAACCAAAATTAGAGTGTGATTGCCAGCGATACTTTAACTGGTa        <  1:724981/139‑1 (MQ=255)                                                                                                                           cTGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTGGTAAag     <  1:765829/139‑1 (MQ=255)                                                                                                                            tGCATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTGGTAAagt    <  2:17081/139‑1 (MQ=255)                                                                                                                            tGCATATGGAGT‑AAAAAATGACCGCATCATATGCACTCTAGTGTCATAAATTATTTTTTGATACCTTAATAATGTCATTTAGCATAAAAAACAACCAAAAATAGTGAGTGAATGCCTGCGATACTTTAACTGGCAAagt    <  1:435889/139‑1 (MQ=255)                                                                                                                              cATATGGTGT‑AAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGATAGTGATTGCCAGCGATACTTTAACTGGTAAagtag  <  2:730472/139‑1 (MQ=255)                                                                                                                                        |                                                                                                                                  GCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGGTGTAAAAAAATGAACGCATCTGATGCACTCCGGTGTCATAAATTATTTTTTGATACCTGAATAATGTCATTTTGCATAAAAAACAACCAAAAATAGAGAGTGATTGCCAGCGATACTTTAACTGGTAAAGTAG  >  NC_000913/293639‑293903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑