| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 742,336 | C→T | G74D (GGC→GAC) | dtpD ← | dipeptide and tripeptide permease D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 742,336 | 0 | C | T | 100.0% | 235.3 / NA | 68 | G74D (GGC→GAC) | dtpD | dipeptide and tripeptide permease D |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (38/30); total (38/30) | |||||||||||
ATTTAAACAGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGG > NC_000913/742202‑742467 | aTTTAAACAGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCgag > 2:1073749/1‑139 (MQ=255)aTTTAAACAGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCgag > 2:86803/1‑139 (MQ=255) aaaCAGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACt > 1:424177/1‑139 (MQ=255) aGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTAt < 1:843847/139‑1 (MQ=255) ggCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATc > 2:179237/1‑139 (MQ=255) ggCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATc > 1:914978/1‑139 (MQ=255) ggCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATc > 1:605047/1‑139 (MQ=255) cAGACGTTAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGc > 1:785821/1‑139 (MQ=255) cAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGc > 1:315175/1‑139 (MQ=255) tAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATaca < 2:315175/139‑1 (MQ=255) agGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGc > 2:619524/1‑126 (MQ=255) agGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGc < 1:619524/126‑1 (MQ=255) agGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCa > 2:145689/1‑139 (MQ=255) aaTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCg < 1:1073749/139‑1 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCg > 2:825570/1‑123 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCg < 1:825570/123‑1 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATa > 2:636381/1‑130 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATa < 1:636381/130‑1 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGa > 1:796971/1‑139 (MQ=255) aTGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACAAgaga > 2:175621/1‑139 (MQ=255) tGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGaa > 2:452038/1‑139 (MQ=255) gACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAc > 1:303055/1‑139 (MQ=255) aCGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATa > 2:806309/1‑127 (MQ=255) aCGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATa < 1:806309/127‑1 (MQ=255) ggatggatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGt < 2:178800/139‑1 (MQ=255) gatggatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTa > 2:650736/1‑139 (MQ=255) tggatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCATGACATACACCAGCGAACAGTAgg > 2:1088676/1‑139 (MQ=255) ggatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGGGAACAGCAGgc < 1:650736/139‑1 (MQ=255) gatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGgcg < 2:554131/139‑1 (MQ=255) cACTTGCACCCAGCACCACATGACCGATGGCCATCAACAACACCCCCAGCATCCCCGCCATGCGATTGTCGAGAACGTTATCCGTCAAAAAGCCACCGAGGATTGGGGTCGCATACACCAGCGAACAGGAGGCGCTaaa < 1:249516/139‑1 (MQ=255) aCTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAAt > 2:377385/1‑139 (MQ=255) cACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGc < 1:858772/101‑1 (MQ=255) cACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGc > 2:858772/1‑101 (MQ=255) cACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTc > 2:522837/1‑139 (MQ=255) aCCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCg < 1:879819/139‑1 (MQ=255) cccAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGt > 2:671987/1‑139 (MQ=255) aGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAg < 1:102990/117‑1 (MQ=255) aGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAg > 2:102990/1‑117 (MQ=255) caccacATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTg > 1:911500/1‑92 (MQ=255) caccacATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTg < 2:911500/92‑1 (MQ=255) caccacATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCg < 1:864763/139‑1 (MQ=255) acaTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCg > 2:146834/1‑129 (MQ=255) acaTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCg < 1:146834/129‑1 (MQ=255) aTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCg < 1:209219/89‑1 (MQ=255) aTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCg > 2:209219/1‑89 (MQ=255) aTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTa < 1:86803/139‑1 (MQ=255) aCCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCg > 2:968393/1‑139 (MQ=255) ccGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCg < 2:1051429/48‑1 (MQ=255) ccGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCg > 1:1051429/1‑48 (MQ=255) ccGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt > 1:1940/1‑139 (MQ=255) ccGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt < 2:620562/139‑1 (MQ=255) aTCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGt < 2:340158/103‑1 (MQ=255) aTCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGt > 1:340158/1‑103 (MQ=255) aTCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGa > 1:730338/1‑70 (MQ=255) aTCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGa < 2:730338/70‑1 (MQ=255) tCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGAt < 1:635839/70‑1 (MQ=255) tCAACAACGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGAt > 2:635839/1‑70 (MQ=255) caacaaCGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGt > 1:486432/1‑139 (MQ=255) aacGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGAt < 1:465430/139‑1 (MQ=255) aacGCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGAt < 1:145689/139‑1 (MQ=255) gCCCCCAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTgg < 1:297254/139‑1 (MQ=255) gCCCCCAGCATCACCGCCATGCGATTGTCGAGAACCTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTgg < 1:452038/139‑1 (MQ=255) ccAGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTgag > 1:896124/1‑139 (MQ=255) aGCATCACCGCCATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGAt < 1:179237/139‑1 (MQ=255) ccATGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag > 2:1009819/1‑139 (MQ=255) aTGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAACGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag < 1:506631/137‑1 (MQ=255) aTGCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAACGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag > 2:506631/1‑137 (MQ=255) gCGATTGTCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAgg > 2:884700/1‑139 (MQ=255) | ATTTAAACAGGCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGG > NC_000913/742202‑742467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |