| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 164,205 | A→G | S701G (AGT→GGT) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,205 | 0 | A | G | 100.0% | 141.1 / NA | 41 | S701G (AGT→GGT) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (21/20); total (21/20) | |||||||||||
GGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCG > NC_000913/164078‑164334 | ggCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCt < 1:405932/139‑1 (MQ=255) aGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTgcg > 1:818302/1‑139 (MQ=255) tGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTa < 1:8030/139‑1 (MQ=255) gAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTaca < 2:573116/139‑1 (MQ=255) tgcCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACggg > 1:263864/1‑139 (MQ=255) acaTATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGc > 1:302643/1‑139 (MQ=255) ggCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCa > 2:940514/1‑139 (MQ=255) gCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCAt > 2:643840/1‑139 (MQ=255) cGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCAtt > 2:513083/1‑139 (MQ=255) cGTACATTCACTACGCGGCCTGAAATCACTCGACATTTAACAGGCACTACGCGGATTACTTGATTGGGGAATGCAGAAACGACTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGAAGGGAAGCCGGATCGCCAtt > 1:459433/1‑139 (MQ=255) gTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTc > 1:1057534/1‑139 (MQ=255) tACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCGGACGGGAAGCCgg > 2:625712/1‑128 (MQ=255) tACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCgg < 1:625712/128‑1 (MQ=255) cATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGtt < 1:118520/139‑1 (MQ=255) tCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATc < 1:503503/139‑1 (MQ=255) cACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCa < 2:818302/139‑1 (MQ=255) cgGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGAt > 2:862409/1‑139 (MQ=255) gCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATT‑GGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAAc > 1:1097981/1‑139 (MQ=255) cTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCgcgc > 2:335990/1‑139 (MQ=255) cTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAAACCGCCCgcgc > 1:227737/1‑139 (MQ=255) tttATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGt < 1:862409/139‑1 (MQ=255) ggCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATg < 2:263864/139‑1 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGc > 1:615387/1‑55 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGc < 2:615387/55‑1 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGc > 1:482503/1‑92 (MQ=255) gCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGc < 2:482503/92‑1 (MQ=255) tACTTGATT‑GGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGc < 2:1097981/139‑1 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGa < 1:914907/67‑1 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGa > 2:914907/1‑67 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTga > 2:1082441/1‑119 (MQ=255) aCTTGATTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTga < 1:1082441/119‑1 (MQ=255) aTTGGGGAATGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGc < 1:643840/139‑1 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTgc > 2:1056669/1‑36 (MQ=255) gggAATGCAGCAACGTCTGGATGGTGAATTGCCTgc < 1:1056669/36‑1 (MQ=37) aTGCAGCAACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATc < 1:301076/139‑1 (MQ=255) caACGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCcgacga < 1:335990/139‑1 (MQ=255) cGTCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCg > 2:599951/1‑139 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGcc < 1:847106/36‑1 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGcc > 2:847106/1‑36 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGccac > 1:79455/1‑123 (MQ=255) tCTGGATGGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGccac < 2:79455/123‑1 (MQ=255) | GGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCG > NC_000913/164078‑164334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |