Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 201,558 A→G P196P (CCA→CCG)  lpxD → UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913201,5580AG100.0% 248.7 / NA 65P196P (CCA→CCG) lpxDUDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/32);  total (33/32)

TCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCACAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAACCAGTGCCAGAT  >  NC_000913/201424‑201680
                                                                                                                                      |                                                                                                                          
tCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGa                                                                                                                        <  2:446935/139‑1 (MQ=255)
          gggCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGt                                                                                                              <  2:608387/139‑1 (MQ=255)
                     aCCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCg                                                                                                   >  2:120501/1‑139 (MQ=255)
                      ccATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGa                                                                                                  <  1:120501/139‑1 (MQ=255)
                          ttACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTaa                                                                                                            <  2:183197/125‑1 (MQ=255)
                          ttACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTaa                                                                                                            >  1:183197/1‑125 (MQ=255)
                           tACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGCGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATcgcg                                                                                             >  1:672188/1‑139 (MQ=255)
                                tGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGgag                                                                                        >  2:517550/1‑139 (MQ=255)
                                        aGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGc                                                                                >  1:484235/1‑139 (MQ=255)
                                             ggTCAGAATTGCCTGATCCAGTCCGGAATAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           <  2:672188/139‑1 (MQ=255)
                                             ggTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           <  2:161005/139‑1 (MQ=255)
                                              gTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGcac                                                                          >  2:81331/1‑139 (MQ=255)
                                              gTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGcac                                                                          >  1:775775/1‑139 (MQ=255)
                                               tCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGt                                                                                  <  2:674090/130‑1 (MQ=255)
                                               tCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGt                                                                                  >  1:674090/1‑130 (MQ=255)
                                                             tCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCgcgg                                                           >  2:1081299/1‑139 (MQ=255)
                                                               cAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCgcggcg                                                         <  1:1081299/139‑1 (MQ=255)
                                                                 gTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCg                                                                                                   >  1:241363/1‑95 (MQ=255)
                                                                 gTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCg                                                                                                   <  2:241363/95‑1 (MQ=255)
                                                                 gTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTgg                                                                                          >  2:871900/1‑104 (MQ=255)
                                                                 gTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTgg                                                                                          <  1:871900/104‑1 (MQ=255)
                                                                 gTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGgcgcg                                                       >  1:996744/1‑139 (MQ=255)
                                                                  tCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           >  2:447677/1‑118 (MQ=255)
                                                                  tCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           <  1:447677/118‑1 (MQ=255)
                                                                   ccGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCt                                                     >  1:937607/1‑139 (MQ=255)
                                                                      gAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGa                                                  <  1:517550/139‑1 (MQ=255)
                                                                      gAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCACGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGa                                                  <  1:800672/139‑1 (MQ=255)
                                                                       aaCAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGAt                                                 >  2:927425/1‑139 (MQ=255)
                                                                       aaCAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGAt                                                 >  2:115416/1‑139 (MQ=255)
                                                                           gTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             <  2:937607/139‑1 (MQ=255)
                                                                           gTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             <  2:996744/139‑1 (MQ=255)
                                                                           gTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             <  2:1045016/139‑1 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATc                                                                                                >  2:724117/1‑87 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATc                                                                                                <  1:724117/87‑1 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           <  1:156307/108‑1 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGca                                                                           >  2:156307/1‑108 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             >  1:1107586/1‑138 (MQ=255)
                                                                            tGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             <  2:1107586/138‑1 (MQ=255)
                                                                                aGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACtatt                                        <  2:775775/139‑1 (MQ=255)
                                                                                 ggCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTgg                                                                                                                    <  1:488588/62‑1 (MQ=255)
                                                                                 ggCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTgg                                                                                                                    >  2:488588/1‑62 (MQ=255)
                                                                                     cAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTgg                                   >  2:860750/1‑139 (MQ=255)
                                                                                     cAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGAGAAGATCCCGCAGATTCGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATCACACTATTATggg                                   >  1:739586/1‑139 (MQ=255)
                                                                                      aGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGc                                                                                >  2:694644/1‑93 (MQ=255)
                                                                                      aGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGc                                                                                <  1:694644/93‑1 (MQ=255)
                                                                                      aGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGc                                  >  2:72321/1‑139 (MQ=255)
                                                                                       gACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCa                                 <  1:81331/139‑1 (MQ=255)
                                                                                                 gTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGAt                       <  1:442032/139‑1 (MQ=255)
                                                                                                      gCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGt                                                                                  >  1:210077/1‑75 (MQ=255)
                                                                                                      gCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGt                                                                                  <  2:210077/75‑1 (MQ=255)
                                                                                                      gCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGa                                                  <  2:926378/107‑1 (MQ=255)
                                                                                                      gCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGa                                                  >  1:926378/1‑107 (MQ=255)
                                                                                                      gCCAACGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTg                  >  2:567622/1‑139 (MQ=255)
                                                                                                           cGATCGTGGTAACTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAAc             <  1:115416/139‑1 (MQ=255)
                                                                                                                      aCTGGGTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAACCAGTGCCAGAt  >  1:187015/1‑139 (MQ=255)
                                                                                                                          ggTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACtattat                                      <  1:829788/99‑1 (MQ=255)
                                                                                                                          ggTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTAGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACtattat                                      >  2:829788/1‑99 (MQ=255)
                                                                                                                           gTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTgg                                                                                          >  1:228132/1‑46 (MQ=255)
                                                                                                                           gTGAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTgg                                                                                          <  2:228132/46‑1 (MQ=255)
                                                                                                                             gAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             >  2:971795/1‑89 (MQ=255)
                                                                                                                             gAAGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGaca                                             <  1:971795/89‑1 (MQ=255)
                                                                                                                              aaGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCgcggcg                                                         <  1:477245/76‑1 (MQ=255)
                                                                                                                              aaGATCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCgcggcg                                                         >  2:477245/1‑76 (MQ=255)
                                                                                                                                  tCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGgcgcg                                                       >  2:539187/1‑74 (MQ=255)
                                                                                                                                  tCCCGCAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGgcgcg                                                       <  1:539187/74‑1 (MQ=255)
                                                                                                                                      |                                                                                                                          
TCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCACAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAACCAGTGCCAGAT  >  NC_000913/201424‑201680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑