| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,830,989 | T→C | V178A (GTT→GCT) | yicH → | putative inner membrane‑anchored periplasmic AsmA family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,830,989 | 0 | T | C | 100.0% | 99.2 / NA | 27 | V178A (GTT→GCT) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/14); total (13/14) | |||||||||||
CGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGT > NC_000913/3830857‑3831121 | cGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGc > 1:340305/1‑139 (MQ=255)cGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGc < 1:464065/139‑1 (MQ=255) aaTAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGcca < 1:138795/139‑1 (MQ=255) aaTAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGcca > 2:531019/1‑139 (MQ=255) aTAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGccac < 2:340305/139‑1 (MQ=255) aCTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGAtt > 2:18168/1‑139 (MQ=255) aGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAg < 2:767212/139‑1 (MQ=255) aGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAg > 1:967104/1‑139 (MQ=255) cgcgcAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGc < 1:412003/139‑1 (MQ=255) cggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGc > 1:1062941/1‑121 (MQ=255) cggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGc < 2:1062941/121‑1 (MQ=255) ggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTAc > 1:338337/1‑109 (MQ=255) ggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTAc < 2:338337/109‑1 (MQ=255) ggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAG‑TTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAgg < 1:578747/118‑1 (MQ=255) ggcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAG‑TTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAgg > 2:578747/1‑118 (MQ=255) aCCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACg > 1:123281/1‑127 (MQ=255) aCCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACg < 2:123281/127‑1 (MQ=255) ggTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGc > 1:866789/1‑71 (MQ=255) ggTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGc < 2:866789/71‑1 (MQ=255) ggTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGa > 1:930359/1‑77 (MQ=255) ggTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGa < 2:930359/77‑1 (MQ=255) cAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCa > 1:611051/1‑70 (MQ=255) cAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCa < 2:611051/70‑1 (MQ=255) cAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGTGTGCCGACATCGCCCGCGGGACATTAACCGGaa > 2:155249/1‑139 (MQ=255) aTCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAc < 1:74086/139‑1 (MQ=255) aTCGCTTTCGCTCAATGATGCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAc < 1:18168/139‑1 (MQ=255) atgatgCTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGt > 2:579695/1‑139 (MQ=255) | CGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGT > NC_000913/3830857‑3831121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |