| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2258263 | 54 (0.740) | 37 (0.670) | 28/206 | 1.4 | 64.3% | intergenic (+275/‑117) | PP_1990/asd | transposase/aspartate‑semialdehyde dehydrogenase |
| ? | NC_002947 | 2530888 = | 0 (0.000) | coding (84/369 nt) | PP_2219 | hypothetical protein | |||||
GCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACCGGCGGATTGTG > NC_002947/2530740‑2531036 | gcaggaccgcgccgaaggccccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaaggtcaagatcaagatcaagatcaagatcaaga > 1:1279917‑M2/149‑150 (MQ=255)gcaggaccgcgccgaaggccccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 2:1471814‑M2/2‑1 (MQ=255) caggaccgcgccgaaggccccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagat > 1:1447012‑M2/148‑150 (MQ=255) gaccgcgccgaaggccccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa > 1:519667‑M2/145‑150 (MQ=255) ctgaggccccaggatggggccttcggcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag < 2:1513340‑M2/1‑1 (MQ=255) ggccccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa < 2:1462395‑M2/18‑1 (MQ=255) ccccatcctggggcaccagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggccagcggtcggcctcctgaagtcgccaagatcaagataaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 2:263048‑M2/20‑1 (MQ=255) cccatcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagat < 1:845004‑M2/21‑1 (MQ=255) catcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatca > 1:1319564‑M2/128‑150 (MQ=255) atcctggggcctcagcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa > 1:274004‑M2/127‑150 (MQ=255) ggccccagcgcttgacgggcatccatgcccgtcacctgcctccgcaacgcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaac < 2:1699227‑M2/31‑8 (MQ=255) gcgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacg < 2:1062801‑M2/38‑1 (MQ=255) cgcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacgg > 2:1131899‑M2/112‑150 (MQ=255) gcttgacgggcatccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggc < 1:753786‑M2/40‑1 (MQ=255) ggcagccatgcccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGAtccacggcaaaggcaactgcaacggcat < 2:1704555‑M2/48‑2 (MQ=255) cccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggc > 1:1357397‑M2/93‑150 (MQ=255) ccgtcacctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggca > 1:857595‑M2/92‑150 (MQ=255) cctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacggca > 1:1192716‑M2/86‑150 (MQ=255) ctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacggcaa > 2:1645069‑M2/85‑150 (MQ=255) ctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacg < 2:1211474‑M2/62‑1 (MQ=255) ctgcctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacg > 1:1211474‑M2/85‑146 (MQ=255) ctccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCaacggcaacggcaacggcaacggcaacggcaacggcaacggcaacggc < 2:1170238‑M2/70‑1 (MQ=255) tccgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAacggcaacggcaacggcaacggcaacggcaacggcaacggcaacggca > 1:665255‑M2/80‑150 (MQ=255) cgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACggcaacggcaacggcaacggcaacggcaacggcaacggcaacggcaac < 2:1447012‑M2/73‑1 (MQ=255) aggcctgcgttcggcctcctgaattcgcgaagatcaacaaaaatatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAAcagca < 1:1338460‑M2/77‑1 (MQ=255) gcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAgg > 2:598877‑M2/72‑150 (MQ=255) gttcggcctcctgagcgctcgaagatcaagatcaagataaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATg < 1:530109‑M2/85‑1 (MQ=255) tcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacggcaac > 2:1287701‑M2/58‑124 (MQ=255) tcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacggcaacggcaacggcaac < 1:1287701‑M2/67‑1 (MQ=255) agtcgccaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCa < 2:665255‑M2/99‑1 (MQ=255) cgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGtt < 1:1645069‑M2/102‑1 (MQ=255) gaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTtac > 2:265041‑M2/46‑150 (MQ=255) atcaagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTactact > 1:919614‑M2/42‑150 (MQ=255) caagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacg > 2:1414474‑M2/40‑89 (MQ=255) caagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacg < 1:1414474‑M2/50‑1 (MQ=255) aagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacg < 2:1300439‑M2/50‑1 (MQ=255) aagatcaagatcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacggcaacggcaacg > 1:1300439‑M2/39‑88 (MQ=255) atcaagatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTActactggcaccccagct > 1:564387‑M2/30‑143 (MQ=255) gatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacg < 1:1737710‑M2/38‑1 (MQ=255) gatcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATcaacggcaacggcaacg > 2:1737710‑M2/25‑62 (MQ=255) tcaagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTgg > 2:1587211‑M2/23‑150 (MQ=255) aagatcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTgggg < 1:265041‑M2/130‑1 (MQ=255) atcaagatcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGcaccccagctcagctgctgtgc < 2:564387‑M2/133‑7 (MQ=255) atcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACcg > 1:1253905‑M2/12‑150 (MQ=255) atcaagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACcg > 2:850644‑M2/12‑150 (MQ=255) aagatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACcggcg < 1:1131899‑M2/142‑1 (MQ=255) gatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAgg < 1:860136‑M2/79‑1 (MQ=255) gatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAgg > 2:860136‑M2/7‑85 (MQ=255) gatcaaGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACCGGCGGa < 2:274004‑M2/144‑1 (MQ=255) aGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACCGGCGGATtgtg < 1:598877‑M2/149‑1 (MQ=255) gatcaagatcaagatcaagatcaaCGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATggg < 2:1049244/87‑1 (MQ=255) gatcaagatcaagatcaagatcaaCGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATggg > 1:1049244/1‑87 (MQ=255) | GCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACAGCAGGTGGATGGGCACAGAATCTCAGTTTACTACTGGCACAGCAGCTGAGCTGGGGTGCCGACCGGCGGATTGTG > NC_002947/2530740‑2531036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |