New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4093604 =	57 (1.080)	5 (0.100)	4/240	NT	7.9%	coding (557/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
	?	NC_002947	4093668 =	61 (1.190)					coding (621/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase

GGTCCGCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4093671‑4093604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGT  >  NC_002947/4093668‑4093754                                                                                                                                                             GGTCCGCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGC                                     <  1:333183/120‑1 GGTCCGCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGC                                     >  2:333183/1‑120      GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGT  >  1:518792/1‑150      GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGAGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCC                 <  1:1226981/135‑1      GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGAGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCC                 >  2:1226981/1‑135                                                                                                                                                             GGTCCGCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4093671‑4093604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGT  >  NC_002947/4093668‑4093754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.