New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4278745	39 (0.740)	6 (0.120)	6/232	NT	13.4%	coding (331/339 nt)	PP_3749	hypothetical protein
	?	NC_002947	= 4278751	41 (0.830)					coding (337/339 nt)	PP_3749	hypothetical protein

TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4278595‑4278745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctcAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC  <  NC_002947/4278751‑4278608                                                                                                                                                                                                                                                                                                         TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCT                                                                                                                                                   >  1:1207022/1‑150                                                                                                                    TGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCG                                >  1:1360267/1‑150                                                                                                                                 CTATATCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATG                   <  2:1360267/150‑1                                                                                                                                      TCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTG              >  2:1419971/1‑150                                                                                                                                         CCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTC                                                                               <  1:1348525/82‑1                                                                                                                                         CCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTC                                                                               >  2:1348525/1‑82                                                                                                                                           GTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATG         <  1:1419971/150‑1                                                                                                                                                  CCGCTCAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC  >  2:768137/1‑150                                                                                                                                                                                                                                                                                                         TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4278595‑4278745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctcAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC  <  NC_002947/4278751‑4278608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.