New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5080875	40 (0.760)	4 (0.080)	4/234	NT	9.4%	coding (712/1236 nt)	lysC	aspartokinase
	?	NC_002947	= 5080881	39 (0.780)					coding (706/1236 nt)	lysC	aspartokinase

TCTTCATCAATGGTAATGAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5080853‑5080875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggt‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA  <  NC_002947/5080881‑5080737                                                                                                                                                                           TCTTCATCAATGGTAATGAGGGTACCCGG‑ACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCC                                                                                 >  1:1349812/1‑89 TCTTCATCAATGGTAATGAGGGTACCCGG‑ACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCC                                                                                 <  2:1349812/89‑1          ATGGTAATGAGGGT‑ACCCGGACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGC                                                                                  <  1:673068/79‑1          ATGGTAATGAGGGT‑ACCCGGACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGC                                                                                  >  2:673068/1‑79                   AGGGT‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA  <  2:718426/150‑1                                                                                                                                                                           TCTTCATCAATGGTAATGAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5080853‑5080875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggt‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA  <  NC_002947/5080881‑5080737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.