| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1297204 = | NA (NA) | 13 (0.290) | 12/264 | 2.9 | NA | coding (386/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | 1297224 = | NA (NA) | coding (406/1329 nt) | PP_1133 | transposase | |||||
ATCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1297357‑1297204‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaTTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCTG > NC_002947/1297224‑1297372 ATCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG < 2:556825/150‑1ATCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG < 2:741774/150‑1 TCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGG > 2:648190/1‑150 TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC > 2:734855/1‑150 TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC > 2:835257/1‑150 TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTCCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC > 1:1105317/1‑150 CCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGG < 1:1011406/142‑1 CCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGG > 2:1011406/1‑142 TTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCTGCTGCGTCCGGTCATTGGTCAGG < 2:997145/150‑1 ATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA < 1:354104/97‑1 ATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA > 2:354104/1‑97 GGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG > 2:839716/1‑89 GGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG < 1:839716/89‑1 agCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCTGCTGCGTCCGGTCATTGGTCAGGCAGCGT < 2:11070/89‑1 ATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCTGCTGCGTCCGGTCATTGGTCAGGCAGCGT > 1:11070/1‑91 CACGCTGCCTGACCAATGACCGGACGCAGCA‑‑‑‑‑‑‑GGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGT < 1:918775/134‑1 CACGCTGCCTGACCAATGACCGGACGCAGCA‑‑‑‑‑‑‑GGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGT > 2:918775/1‑134 TGACCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACT > 2:256980/1‑150 AATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTG < 2:905686/128‑1 AATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTG > 1:905686/1‑128 AATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAA < 1:277436/84‑1 AATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAA > 2:277436/1‑84 ATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCT < 1:105416/110‑1 ATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCT > 2:105416/1‑110 ACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAG > 1:250217/1‑150 GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCA > 2:456521/1‑150 GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCA > 1:78097/1‑150 GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCA > 1:447268/1‑150 GTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCAT > 2:230545/1‑150 GTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCAT > 2:377893/1‑150 GTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCAT < 1:969971/150‑1 TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGG > 2:1071982/1‑144 TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGG < 1:1071982/144‑1 TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCAT > 2:1084334/1‑131 TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCAT < 1:1084334/131‑1 CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT > 1:590888/1‑150 CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT < 2:653232/150‑1 ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCTG > 2:66984/1‑150 ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCTG > 1:244323/1‑150 ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGC < 2:936520/127‑1 ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGC > 1:936520/1‑127 ATCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1297357‑1297204‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaTTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCTG > NC_002947/1297224‑1297372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |