| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5201663 | 29 (0.690) | 7 (0.230) | 7/192 | 2.8 | 22.6% | intergenic (‑101/‑79) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | = 5201684 | 27 (0.890) | intergenic (‑122/‑58) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
GCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5201491‑5201663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT < NC_002947/5201684‑5201541 GCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGC > 2:16998/1‑150 CACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTC > 1:112765/1‑150 ACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCT > 2:322093/1‑150 CAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTC < 1:16998/150‑1 AGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGG < 1:371388/150‑1 GGCGGGTATTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCT < 2:258081/150‑1 TACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACC > 1:188284/1‑140 TACGGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACC < 2:188284/140‑1 ACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTACAAGGCCCGCACAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGC > 1:653741/1‑150 CAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGT > 1:954965/1‑150 GTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 1:795556/150‑1 GTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTT < 2:954965/150‑1 TCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACC < 2:653741/150‑1 GTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCT > 1:95026/1‑63 GTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCT < 2:95026/63‑1 GCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGC < 1:72379/109‑1 GCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGC > 2:72379/1‑109 TTGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTACAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGC < 1:747587/150‑1 gacgtggGCCGCCCTCGTCGCGCGCAAACCCCCTCCAACAGCGATCGCACCGCGGTAGCAGCGGGTTTACCCGCAAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGC < 2:745482/143‑1 GCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCAC < 1:727943/150‑1 CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGA > 1:255606/1‑150 CGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGCACAacc > 2:112765/1‑147 TCTACGCGGGTAAACCCGTTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACC < 1:966388/150‑1 TTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGT > 1:603074/1‑85 TTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGT < 2:603074/85‑1 TTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAG < 2:98740/45‑1 TTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAG > 1:98740/1‑45 GGTAACCCCGCTCCAACAGGGTTCGAAGCGAGGTAGGAGCGCGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGt < 2:719699/150‑2 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCTGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACAC < 1:807721/150‑1 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCT > 2:154970/1‑114 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCT < 1:154970/114‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCGGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCAGGACCGAGAACTACTACACt > 1:402079/1‑149 CGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT > 1:330663/1‑150 GCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5201491‑5201663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGG‑AAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT < NC_002947/5201684‑5201541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |