New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2418440 | 35 (1.110) | 3 (0.100) | 3/238 | NT | 8.3% | coding (1432/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
? | NC_002947 | = 2418467 | 33 (1.090) | coding (1459/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
GCACAAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2418290‑2418440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTGGTAGCCTTGGGGCAATTGCCGGATGAATTCGTCGGCATGGGCGCCGCGGGCTGCTGCTTCGACTTCAGCCAAGGTCGCCTCGGGCCGGCCATAACGAATGTTGGCCTCCA < NC_002947/2418467‑2418321 GCACAAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCG < 1:541627/150‑1 GAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGG < 1:214573/150‑1 CAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTG < 1:420846/103‑1 CAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTG > 2:420846/1‑103 cctCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTGGTAGCCTTGGGGCAATTGCCGGATGAATTCGTCGGCATGGGCGCCGCGGGCTGCTGCTT > 1:359926/4‑100 cctCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTGGTAGCCTTGGGGCAATTGCCGGATGAATTCGTCGGCATGGGCGCCGCGGGCTGCTGCTT < 2:359926/97‑1 CGCCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTGGTAGCCTTGGGGCAATTGCCGGATGAATTCGTCGGCATGGGCGCCGCGGGCTGCTGCTTCGACTTCAGCCAAGGTCGCCTCGGGCCGGCCATAACGAATGTTGGCCTCCA > 2:811588/1‑150 GCACAAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2418290‑2418440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcCGGAAAGGCCGATGCCGCCCTCCCCCAGCGGGGTCTGGTAGCCTTGGGGCAATTGCCGGATGAATTCGTCGGCATGGGCGCCGCGGGCTGCTGCTTCGACTTCAGCCAAGGTCGCCTCGGGCCGGCCATAACGAATGTTGGCCTCCA < NC_002947/2418467‑2418321 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |