New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2486683 =	40 (1.260)	6 (0.200)	5/232	NT	15.1%	coding (1232/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
	?	NC_002947	2486716 =	30 (1.010)					coding (1265/1359 nt)	spuC‑I	polyamine:pyruvate transaminase

GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2486719‑2486683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG  >  NC_002947/2486716‑2486839                                                                                                                                                                   GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGA                                            >  1:825966/1‑119 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGA                                            <  2:825966/119‑1 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAG                                                                        >  1:564376/1‑91 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAG                                                                        <  2:564376/91‑1         CATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACA                             >  1:161198/1‑126         CATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACA                             <  2:161198/126‑1                              CATGATCATCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG  >  1:268488/1‑132                              CATGATCATCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG  <  2:268488/132‑1                                                                                                                                                                   GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2486719‑2486683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG  >  NC_002947/2486716‑2486839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.