| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2575777 | 46 (1.450) | 3 (0.100) | 3/238 | NT | 6.4% | coding (911/1689 nt) | PP_2258 | sensory box protein |
| ? | NC_002947 | = 2575803 | 43 (1.420) | coding (937/1689 nt) | PP_2258 | sensory box protein | |||||
GCGTGACCCTGTACCCGCAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2575624‑2575777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC < NC_002947/2575803‑2575659 GCGTGACCCTGTACCCGAAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGA < 2:703517/150‑1 CCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGG < 1:559197/150‑1 ACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTC < 1:528573/84‑1 ACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTC > 2:528573/1‑84 ACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC < 1:460527/150‑1 GCGTGACCCTGTACCCGCAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2575624‑2575777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC < NC_002947/2575803‑2575659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |