New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5696404 | 26 (0.820) | 3 (0.100) | 3/238 | NT | 9.7% | coding (1072/1272 nt) | pyrC' | dihydroorotase‑like protein |
? | NC_002947 | = 5696426 | 31 (1.020) | coding (1094/1272 nt) | pyrC' | dihydroorotase‑like protein |
AGCCGCACGAGCGCGACGCCAAGCTGGCCCCGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGG‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5696255‑5696404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgg‑ccGGCAGGCGCAGGGCGGCAGCCGGGCCGCTGCTCAGGCGGGCCAGCAAGGTCGGCAGGTCGAGCAGGCCGTCCTGCACCAGGGTCATGGCCAGTGGCAGCAGCAACTCGACGCTGCTGATACCCGGCTCGGTGG < NC_002947/5696426‑5696294 AGCCGCACGAGCGCGACGCCAAGCTGGCCCCGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGG‑CC > 1:722480/1‑150 ACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGG‑CCGGCAGGCGCAGGGCGGCAGCCGGGC < 1:155453/73‑1 ACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGG‑CCGGCAGGCGCAGGGCGGCAGCCGGGC > 2:155453/1‑73 CCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCC‑GGCCGCTGCTCAGGCGGGCCAGCAAGGTCGGCAGGTCGAGCAGGCCGTCCTGCACCAGGGTCATGGCCAGTGGCAGCAGCAACTCGACGCTGCTGATACCCGGCTCGGTGG > 1:448759/1‑150 AGCCGCACGAGCGCGACGCCAAGCTGGCCCCGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGG‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5696255‑5696404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgg‑ccGGCAGGCGCAGGGCGGCAGCCGGGCCGCTGCTCAGGCGGGCCAGCAAGGTCGGCAGGTCGAGCAGGCCGTCCTGCACCAGGGTCATGGCCAGTGGCAGCAGCAACTCGACGCTGCTGATACCCGGCTCGGTGG < NC_002947/5696426‑5696294 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |