New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5877975	21 (0.660)	4 (0.130)	4/236	NT	16.3%	coding (67/903 nt)	PP_5151	hypothetical protein
	?	NC_002947	= 5878001	21 (0.700)					coding (41/903 nt)	PP_5151	hypothetical protein

ATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5877844‑5877975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG  <  NC_002947/5878001‑5877969                                                                                                                                                                       ATCATCCAGCCCTTCGATCGGTTGCCCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTG                 >  1:331552/1‑150             TTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGC     <  2:331552/150‑1                                                               TGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG  <  1:802008/103‑1                                                               TGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG  >  2:802008/1‑103                                                                                                                                                                       ATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5877844‑5877975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG  <  NC_002947/5878001‑5877969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.