New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5877975 | 21 (0.660) | 4 (0.130) | 4/236 | NT | 16.3% | coding (67/903 nt) | PP_5151 | hypothetical protein |
? | NC_002947 | = 5878001 | 21 (0.700) | coding (41/903 nt) | PP_5151 | hypothetical protein |
ATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5877844‑5877975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG < NC_002947/5878001‑5877969 ATCATCCAGCCCTTCGATCGGTTGCCCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTG > 1:331552/1‑150 TTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGC < 2:331552/150‑1 TGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG < 1:802008/103‑1 TGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG > 2:802008/1‑103 ATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5877844‑5877975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTTGCTCTGCTGCTGCTTGGCTGGGCCGGGCAGG < NC_002947/5878001‑5877969 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |