New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3262453 | 34 (1.070) | 4 (0.130) | 4/240 | NT | 10.8% | coding (279/567 nt) | PP_2860 | nicotinamide mononucleotide transporter |
? | NC_002947 | = 3262489 | 33 (1.080) | coding (243/567 nt) | PP_2860 | nicotinamide mononucleotide transporter |
CCACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTA > NC_002947/3262306‑3262601 | ccACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCcggc > 2:677678/1‑150 (MQ=255) gTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCa > 1:187082/1‑150 (MQ=255) gTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGCGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCa < 2:206815/150‑1 (MQ=255) gCCAGCACTGCAGGCGTTTCTGCGCCATCCAAAATCGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGc > 1:203442/1‑150 (MQ=255) aGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCCCGAGCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCtg < 2:203442/150‑1 (MQ=255) aCTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGa > 1:134655/1‑150 (MQ=255) gcCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGc > 1:618858/1‑150 (MQ=255) ccACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcg > 2:626287‑M2/1‑148 (MQ=255) caGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGga < 1:677678/150‑1 (MQ=255) aGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTggcgggcg > 1:483269/1‑150 (MQ=255) cTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccg > 1:575845‑M1/1‑93 (MQ=255) cTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccg < 2:575845‑M1/131‑39 (MQ=255) gAATTCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCNTNTNAGCAGTGCCGGGCGNNGCAGACGGGAGACCTGGCGGGCGTCTTc < 1:552855/150‑1 (MQ=255) aTCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAg > 2:26225/1‑150 (MQ=255) tCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc < 2:187082/150‑1 (MQ=255) cGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc < 1:414939/148‑1 (MQ=255) cGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc > 2:414939/1‑148 (MQ=255) ggTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTg > 1:606887/1‑150 (MQ=255) ggTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCggg < 2:483269/150‑1 (MQ=255) gCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGgcgc > 2:787331/1‑150 (MQ=255) tCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccgg > 2:176569‑M1/1‑72 (MQ=255) tCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccgg < 1:176569‑M1/111‑40 (MQ=255) gccagGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCAtt < 1:63755/150‑1 (MQ=255) tCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCa > 2:697899/1‑150 (MQ=255) ccAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGAAGACGGGAGACCTGGCGAGTGATTATAACATGGGCGTGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAg < 1:787331/150‑1 (MQ=255) ccATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGt > 2:349977/1‑150 (MQ=255) aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg > 1:563188/1‑150 (MQ=255) aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg < 2:563188/150‑1 (MQ=255) aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg > 1:385371/1‑150 (MQ=255) ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACa > 1:211374/1‑131 (MQ=255) ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACa < 2:211374/131‑1 (MQ=255) ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGc < 2:618858/150‑1 (MQ=255) ccAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTgca > 1:4941/1‑150 (MQ=255) ccAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTgca < 2:134655/150‑1 (MQ=255) ggcggcGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCaa < 2:385371/150‑1 (MQ=255) ggcggcGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCaa < 1:26225/150‑1 (MQ=255) cagcagCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGa < 2:436419/150‑1 (MQ=255) cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGc < 2:642736/112‑1 (MQ=255) cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGc > 1:642736/1‑112 (MQ=255) cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTa > 1:126402/1‑150 (MQ=255) ccGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctgga < 1:176569‑M2/111‑73 (MQ=255) ccGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctgga > 2:176569‑M2/1‑39 (MQ=255) cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcag < 2:575845‑M2/131‑94 (MQ=255) cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcag > 1:575845‑M2/1‑38 (MQ=255) cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTa > 1:681196/1‑150 (MQ=255) cGtctgccacgcccggcactgctcacaggcctggccgccggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcagcctggtcgcgcaactgtgg > 2:626287‑M1/1‑2 (MQ=255) | CCACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTA > NC_002947/3262306‑3262601 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |