New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5721033 = | 33 (1.040) | 3 (0.100) | 3/234 | NT | 8.3% | coding (1502/1944 nt) | PP_5021 | methyl‑accepting chemotaxis transducer |
? | NC_002947 | 5721067 = | 35 (1.170) | coding (1536/1944 nt) | PP_5021 | methyl‑accepting chemotaxis transducer |
CCTGGCGGCCATGCAGCACCTGGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGACAGCAGCAAGAGCCTGACCGAACAAAGCGT > NC_002947/5720920‑5721216 | agcgggtcacttcgtcggtaccgttgtgcaggctgtcgatcagttggccgatctcctcggtcgccgtcgacgtgcgctgggccaggccacgcacctcatcggccaccacggcaAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGc > 2:201406‑M1/114‑150 (MQ=255) cTGGCGGCCATGCAGCACCTGGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGcc > 2:205008/1‑150 (MQ=255) ccATGCAGCACCTGGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGtggtgg < 2:539745/150‑1 (MQ=255) atacagcaCCTCGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGcc < 2:569317/147‑1 (MQ=255) aTGCAGCACCTGGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGcc > 1:790898/1‑150 (MQ=255) gCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGt > 2:169847/1‑150 (MQ=255) cAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGtg < 1:518269/150‑1 (MQ=255) cAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAg > 2:280470/1‑150 (MQ=255) aaaGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAgc > 2:541598/1‑150 (MQ=255) aaaGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAgc > 1:439278/1‑150 (MQ=255) aaGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGCCCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACTGGCCGGTGAGGGCGTGCGCGTCTTGGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAgcg > 2:523939/1‑150 (MQ=255) aGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAgcgc > 1:748019/1‑150 (MQ=255) gcaTTCTCGATGTGATCAAGTCGGTGTACCAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACgg < 1:217079/150‑1 (MQ=255) tctcGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGt < 2:98778/140‑1 (MQ=255) tctcGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGt > 1:98778/1‑140 (MQ=255) cGATATAATAAAGTGGGTGTGCGAGCAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCCGCGCACGTCGACGGCGACCgc > 2:189159/1‑149 (MQ=37) gATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCgag < 1:169847/150‑1 (MQ=255) gATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCgag < 2:748019/150‑1 (MQ=255) aTGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCgagg < 1:259557/150‑1 (MQ=255) aTGTGATCAAGCCGGTGTCCGAACAGCCCAATCTGCTGGCGTTGAACGAAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCCGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCATGGACCAGCGCACGTCGACGGGGACAgagg > 2:56158/1‑150 (MQ=38) tgtCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGa < 2:845026/150‑1 (MQ=255) cGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGa > 2:149846/1‑150 (MQ=255) gAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCAc < 2:845263/113‑1 (MQ=255) gAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCAc > 1:845263/1‑113 (MQ=255) gAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGAc > 1:95942/1‑150 (MQ=255) aCCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCTCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTg < 1:438561/150‑1 (MQ=255) aCCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTg > 1:310425/1‑150 (MQ=255) cAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGca < 2:499574/150‑1 (MQ=255) ggCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGATGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTAc < 2:310425/150‑1 (MQ=255) gAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGAt < 2:26272/123‑1 (MQ=255) gAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGAt > 1:26272/1‑123 (MQ=255) gcaaagccgcgcccggcctcaccggcccgtgcggcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCt > 2:201406‑M2/38‑150 (MQ=255) gAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAAc < 1:338912/126‑1 (MQ=255) gAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAAc > 2:338912/1‑126 (MQ=255) agccgcgcccggcctcaccggcccgtgcggcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCgag < 2:837161‑M2/58‑1 (MQ=255) agccgcgcccggcctcaccggcccgtgcggcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCgag > 1:837161‑M2/34‑91 (MQ=255) AGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCt > 2:95942‑M1/1‑150 (MQ=255) gggCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGAcagca < 1:56158/150‑1 (MQ=255) aGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGCAGCGAGGCCTGGTTCTGCGCTTTTCGACGGCGACCGATGAGATAGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGACAGCAGCAAGAGcc > 1:445342/1‑150 (MQ=255) gCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGaa < 2:182291/117‑1 (MQ=255) gCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGaa > 1:182291/1‑117 (MQ=255) cGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGACAGCAGCAAGAGCCTGAc > 1:6472/1‑150 (MQ=255) gcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAAc < 2:482527‑M2/71‑1 (MQ=255) gcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAAc > 1:482527‑M2/5‑75 (MQ=255) tGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGACAGCAGCAAGAGCCTGACCGAACAAAGCGt < 1:541598/150‑1 (MQ=255) | CCTGGCGGCCATGCAGCACCTGGCAGGCGAGAGCCAAAGGATTGGCAGCATTCTCGATGTGATCAAGTCGGTGTCCGAACAGACCAATCTGCTGGCGTTGAACGCAGCGATCGAAGCCGCACGGGCCGGTGAGGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCTTGCTGGACAGCAGCAAGAGCCTGACCGAACAAAGCGT > NC_002947/5720920‑5721216 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |