New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1590210 = | 97 (1.100) | 6 (0.070) | 6/238 | NT | 6.3% | coding (957/1638 nt) | PP_1394 | acetolactate synthase large subunit |
? | NC_002947 | 1590235 = | 85 (0.990) | coding (982/1638 nt) | PP_1394 | acetolactate synthase large subunit |
TGGCGCTCAGCAAACGTGTCTGGCTCAGGGTTGGCTGGTCCCAGTCTGCTGCCAGGACCTTGCGCAGGTCGGCCACGCGGGCCACGCCCCAAGTGCTTTCGTGCACTGGCTGCGGCTGGGCTTGCACGGCACCGAGCAGCGCTTCGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1590361‑1590210 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGAGCCAGACACGTTTGCTGAGCGCCATACTGGAGCGCCTGCCTGAT > NC_002947/1590235‑1590381 TGGCGCTCAGCAAACGTGTCTGGCTCAGGGTTGGCTGGTCCCAGTCTGCTGCCAGGACCTTGCGCAGGTCGGCCACGCGGGCCACGCCCCAAGTGCTTTCGTGCACTGGCTGCGGCTGGGCTTGCACGGCACCGAGCAGCGCTTCGGCTG > 2:1568893/1‑150 TTGCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTG < 1:2389503/106‑1 TTGCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTG > 2:2389503/1‑106 TGCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGC > 1:2291267/1‑107 TGCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGC < 2:2291267/107‑1 GCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGA > 1:1346410/1‑132 GCACGGCACCGAGCAGCGCTTCGGCTGCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGA < 2:1346410/132‑1 GCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGAGCCAGACACGTTTGCTGAGCGCCATACTGGAGCGCCTGCCTGAT < 2:96446/150‑1 GCCGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGAACGTGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGAGCCAGACACGTTTGCTGAGCGCCATACTGGAGCGCCTGCCTGAT < 1:2332600/150‑1 TGGCGCTCAGCAAACGTGTCTGGCTCAGGGTTGGCTGGTCCCAGTCTGCTGCCAGGACCTTGCGCAGGTCGGCCACGCGGGCCACGCCCCAAGTGCTTTCGTGCACTGGCTGCGGCTGGGCTTGCACGGCACCGAGCAGCGCTTCGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1590361‑1590210 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccGTGCAAGCCCAGCCGCAGCCAGTGCACGAAAGCACTTGGGGCGTGGCCCGCGTGGCCGACCTGCGCAAGGTCCTGGCAGCAGACTGGGACCAGCCAACCCTGAGCCAGACACGTTTGCTGAGCGCCATACTGGAGCGCCTGCCTGAT > NC_002947/1590235‑1590381 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |