New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2331393 | 75 (0.850) | 4 (0.050) | 4/228 | NT | 5.3% | coding (1703/1776 nt) | PP_2048 | acyl‑CoA dehydrogenase |
? | NC_002947 | = 2331416 | 74 (0.900) | coding (1726/1776 nt) | PP_2048 | acyl‑CoA dehydrogenase |
GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2331239‑2331393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccacCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACATC < NC_002947/2331416‑2331268 GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGC > 1:2334086/1‑150 TTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCG > 1:701857/1‑150 CAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGG < 2:701857/150‑1 AAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGG > 1:577669/1‑130 AAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGG < 2:577669/130‑1 GCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAAC > 2:1624045/1‑150 ACCGAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACAT > 2:537959/1‑150 ACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGC < 1:982193/120‑1 ACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGC > 2:982193/1‑120 CCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCGCATC < 2:1004565/150‑1 GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2331239‑2331393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccacCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACATC < NC_002947/2331416‑2331268 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |