New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2340774 | 64 (0.720) | 9 (0.110) | 9/238 | NT | 11.9% | intergenic (+65/‑50) | dctA‑II/yraO | C4‑dicarboxylate transport protein/transporter YraO |
? | NC_002947 | = 2340789 | 71 (0.830) | intergenic (+80/‑35) | dctA‑II/yraO | C4‑dicarboxylate transport protein/transporter YraO |
CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2340623‑2340774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC < NC_002947/2340789‑2340641 CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGG > 2:1324373/1‑150 TGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGC > 1:1334440/1‑150 CGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGAC < 2:1376705/150‑1 CGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTGTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGC < 2:1161436/150‑1 gGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCCCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCC < 1:1230270/149‑1 TCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGG > 2:1787897/1‑108 TCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGG < 1:1787897/108‑1 CGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCT > 2:588894/1‑84 CGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCT < 1:588894/84‑1 CCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCTGACCC > 1:2347607/1‑63 CCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCTGACCC < 2:2347607/63‑1 GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC < 1:481743/150‑1 GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC < 2:1258155/150‑1 GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC < 1:1880473/150‑1 GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGCGCGAACACCGGCTC > 2:1978951/1‑150 GCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGGGAGAAAAAAGCTTGAAGGTGTCGTGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCG > 1:1499297/1‑150 CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC > 1:1219587/1‑150 CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTT < 2:948035/67‑1 CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTT > 1:948035/1‑67 CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2340623‑2340774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC < NC_002947/2340789‑2340641 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |