New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2353681 =	81 (0.910)	6 (0.070)	6/236	NT	7.2%	coding (894/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein
	?	NC_002947	2353703 =	77 (0.910)					coding (872/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein

ACAACTGGCCATGGCCAAGGCCCGGGCAGCCCAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGATCACCGGC‑GTGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2353834‑2353681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcGCGCGGATCACGGTGTCCTGTTCGTCCTGCTCGGCGAGCTGCTGGTGGGCCTGGGC  >  NC_002947/2353703‑2353758                                                                                                                                                                                                                     ACAACTGGCCATGGCCAAGGCCCGGGCAGCCCAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGATCACCGGC‑GTGGT                                                              >  1:10544/1‑150   AACTGGCCATGGCCAAGGCCCGGGCAGCCCAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGAAACCGTGATCCGCGCGCCGATCACCGGC‑GTGGTCG                                                            >  1:1324714/1‑150                                CAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGACCA‑CGCCGGTGATCGGCGCGCGGA                                                   >  1:1019223/1‑130                                CAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGACCA‑CGCCGGTGATCGGCGCGCGGA                                                   <  2:1019223/130‑1                                                                                                  GCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGACCACGCCG‑GTGATCGGCGCGCGGATCACGGTGTCCTGT                                     <  1:908141/78‑1                                                                                                  GCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGACCACGCCG‑GTGATCGGCGCGCGGATCACGGTGTCCTGT                                     >  2:908141/1‑78                                                                                                                                     GCCGATCACCGGC‑GTGGTCGGCGCGCGGATCACGGTGTCCTGTTCGTCCTGCTCGGCGAGCTGCTGGTGGGCCTGGGC  <  1:2151182/78‑1                                                                                                                                     GCCGATCACCGGC‑GTGGTCGGCGCGCGGATCACGGTGTCCTGTTCGTCCTGCTCGGCGAGCTGCTGGTGGGCCTGGGC  >  2:2151182/1‑78                                                                                                                                                                                                                     ACAACTGGCCATGGCCAAGGCCCGGGCAGCCCAGGCCGAGGCCGAGCTGCAACAACGGGCAGCGGCCCTGGCACGCGCCCAGGCCCACCAGCAGCTCGCCGAGCAGGACGAACAGGACACCGTGATCCGCGCGCCGATCACCGGC‑GTGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2353834‑2353681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcGCGCGGATCACGGTGTCCTGTTCGTCCTGCTCGGCGAGCTGCTGGTGGGCCTGGGC  >  NC_002947/2353703‑2353758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.